Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 AC140658.5-201ENST00000438532 169 ntBASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 AC112191.1-201ENST00000523689 701 ntBASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 LTB4R2-202ENST00000528054 3092 ntBASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 AC004835.2-201ENST00000603762 682 ntBASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 AL645728.2-201ENST00000641974 660 ntBASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 TSEN15P1-201ENST00000423257 515 ntBASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 AC099522.2-201ENST00000607001 744 ntBASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC62Q6P9F0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 AC002056.1-201ENST00000395613 760 ntBASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC62Q6P9F0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 MIR4515-201ENST00000584082 81 ntBASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 AC093028.1-201ENST00000622998 982 ntBASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms