Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 RN7SL618P-201ENST00000477850 296 ntBASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 KRT18P34-201ENST00000488218 1270 ntBASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF38BQ5VTL8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 AL022328.3-201ENST00000607943 679 ntBASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.38■□□□□ 0.53
PRPF38BQ5VTL8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 AC098850.1-201ENST00000419919 790 ntBASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 EIF4HP1-201ENST00000453115 687 ntBASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 AC010328.2-201ENST00000597698 1111 ntBASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 HLA-C-210ENST00000640219 976 ntBASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 AC012569.1-201ENST00000591191 1524 ntBASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF38BQ5VTL8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 SDHAP3-202ENST00000515467 728 ntBASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 AC105233.2-201ENST00000523697 349 ntBASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 AF228730.5-201ENST00000530288 346 ntBASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 RN7SL828P-201ENST00000607615 303 ntBASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.36■□□□□ 0.53
PRPF38BQ5VTL8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms