Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 AC096633.1-201ENST00000422446 749 ntBASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 TPSP2-201ENST00000561760 610 ntBASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 AP002414.4-201ENST00000589764 1148 ntBASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 AC005915.1-201ENST00000624912 2018 ntBASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 KRT8P47-201ENST00000604727 1398 ntBASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.91□□□□□ -0.02
ATPAF1Q5TC12 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 AC233702.3-201ENST00000578656 1387 ntBASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 DDX43P3-201ENST00000441064 443 ntBASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms