Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 KRT19P2-202ENST00000557173 1012 ntBASIC20.82■□□□□ 0.92
TNNI3KQ59H18 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 AC023511.2-201ENST00000618803 211 ntBASIC20.82■□□□□ 0.92
TNNI3KQ59H18 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TNNI3KQ59H18 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 KRT8P49-201ENST00000604166 1432 ntBASIC20.81■□□□□ 0.92
TNNI3KQ59H18 AC025580.3-201ENST00000617932 1424 ntBASIC20.81■□□□□ 0.92
TNNI3KQ59H18 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI3KQ59H18 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 AC004832.2-201ENST00000426397 482 ntBASIC20.8■□□□□ 0.92
TNNI3KQ59H18 AL513480.1-201ENST00000451731 511 ntBASIC20.8■□□□□ 0.92
TNNI3KQ59H18 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 AC002347.1-201ENST00000569543 541 ntBASIC20.8■□□□□ 0.92
TNNI3KQ59H18 AC023141.13-201ENST00000604991 943 ntBASIC20.8■□□□□ 0.92
TNNI3KQ59H18 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI3KQ59H18 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms