Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.26□□□□□ -0.13
SP6Q3SY56 ECEL1P3-201ENST00000427961 737 ntBASIC14.26□□□□□ -0.13
SP6Q3SY56 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.26□□□□□ -0.13
SP6Q3SY56 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.26□□□□□ -0.13
SP6Q3SY56 NAPSB-206ENST00000562112 1266 ntBASIC14.26□□□□□ -0.13
SP6Q3SY56 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.26□□□□□ -0.13
SP6Q3SY56 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SP6Q3SY56 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SP6Q3SY56 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
SP6Q3SY56 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.26□□□□□ -0.13
SP6Q3SY56 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.26□□□□□ -0.13
SP6Q3SY56 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.26□□□□□ -0.13
SP6Q3SY56 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SP6Q3SY56 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SP6Q3SY56 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.26□□□□□ -0.13
SP6Q3SY56 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SP6Q3SY56 AL513523.2-202ENST00000427283 2040 ntBASIC14.25□□□□□ -0.13
SP6Q3SY56 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.25□□□□□ -0.13
SP6Q3SY56 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SP6Q3SY56 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.25□□□□□ -0.13
SP6Q3SY56 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.25□□□□□ -0.13
SP6Q3SY56 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 AC096633.1-201ENST00000422446 749 ntBASIC14.25□□□□□ -0.13
SP6Q3SY56 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.25□□□□□ -0.13
SP6Q3SY56 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 AC124947.2-201ENST00000547118 1133 ntBASIC14.25□□□□□ -0.13
SP6Q3SY56 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 AC068418.2-201ENST00000577309 3703 ntBASIC14.25□□□□□ -0.13
SP6Q3SY56 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SP6Q3SY56 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 AC010460.3-201ENST00000511359 1579 ntBASIC14.25□□□□□ -0.13
SP6Q3SY56 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.25□□□□□ -0.13
SP6Q3SY56 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.25□□□□□ -0.13
SP6Q3SY56 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SP6Q3SY56 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.25□□□□□ -0.13
SP6Q3SY56 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP6Q3SY56 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
SP6Q3SY56 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.24□□□□□ -0.13
SP6Q3SY56 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
SP6Q3SY56 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SP6Q3SY56 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.24□□□□□ -0.13
SP6Q3SY56 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
SP6Q3SY56 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SP6Q3SY56 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.24□□□□□ -0.13
SP6Q3SY56 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SP6Q3SY56 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.24□□□□□ -0.13
SP6Q3SY56 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.24□□□□□ -0.13
SP6Q3SY56 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.24□□□□□ -0.13
SP6Q3SY56 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 MIR718-201ENST00000390190 70 ntBASIC14.24□□□□□ -0.13
SP6Q3SY56 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SP6Q3SY56 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP6Q3SY56 RASA4DP-201ENST00000460726 1199 ntBASIC14.24□□□□□ -0.13
SP6Q3SY56 AC068472.1-201ENST00000474589 881 ntBASIC14.24□□□□□ -0.13
SP6Q3SY56 AC008550.1-201ENST00000511500 884 ntBASIC14.24□□□□□ -0.13
SP6Q3SY56 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.24□□□□□ -0.13
SP6Q3SY56 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.24□□□□□ -0.13
SP6Q3SY56 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.24□□□□□ -0.13
SP6Q3SY56 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms