Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 KRT16P4-201ENST00000453883 522 ntBASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 AC112698.1-201ENST00000510299 916 ntBASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 TSPY19P-201ENST00000418461 509 ntBASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 AL845331.1-201ENST00000424978 1190 ntBASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 TPM4P1-201ENST00000436100 807 ntBASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 TSPY18P-201ENST00000441642 509 ntBASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 FOSL1P1-201ENST00000511041 816 ntBASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 AC009533.2-201ENST00000543664 586 ntBASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 FLJ38576-201ENST00000623820 2459 ntBASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 AC008741.2-201ENST00000612792 3115 ntBASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 AC011270.2-201ENST00000624293 2550 ntBASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PCGF3Q3KNV8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 AC138894.3-201ENST00000603787 634 ntBASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 AC012313.10-201ENST00000623509 926 ntBASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 AC132938.6-201ENST00000623828 1655 ntBASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF3Q3KNV8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PCGF3Q3KNV8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF3Q3KNV8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF3Q3KNV8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF3Q3KNV8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms