Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.31■□□□□ 0.36
CDH17Q12864 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH17Q12864 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH17Q12864 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH17Q12864 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH17Q12864 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH17Q12864 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 AL356309.3-201ENST00000624132 1934 ntBASIC17.31■□□□□ 0.36
CDH17Q12864 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH17Q12864 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH17Q12864 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH17Q12864 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH17Q12864 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 NCF1C-201ENST00000438382 1427 ntBASIC17.3■□□□□ 0.36
CDH17Q12864 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH17Q12864 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDH17Q12864 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CDH17Q12864 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDH17Q12864 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 TUBB8P12-201ENST00000308911 1335 ntBASIC17.3■□□□□ 0.36
CDH17Q12864 TUBB7P-202ENST00000428444 1305 ntBASIC17.3■□□□□ 0.36
CDH17Q12864 TUBB8P7-204ENST00000567960 1332 ntBASIC17.3■□□□□ 0.36
CDH17Q12864 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH17Q12864 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH17Q12864 PRELID1P1-202ENST00000567272 903 ntBASIC17.3■□□□□ 0.36
CDH17Q12864 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH17Q12864 NKAPP1-205ENST00000585790 367 ntBASIC17.3■□□□□ 0.36
CDH17Q12864 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
CDH17Q12864 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH17Q12864 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH17Q12864 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDH17Q12864 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDH17Q12864 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH17Q12864 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDH17Q12864 AC078925.2-201ENST00000624013 1973 ntBASIC17.29■□□□□ 0.36
CDH17Q12864 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH17Q12864 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH17Q12864 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH17Q12864 FLJ38576-201ENST00000623820 2459 ntBASIC17.29■□□□□ 0.36
CDH17Q12864 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDH17Q12864 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH17Q12864 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDH17Q12864 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.29■□□□□ 0.36
CDH17Q12864 TSPY19P-201ENST00000418461 509 ntBASIC17.29■□□□□ 0.36
CDH17Q12864 TSPY18P-201ENST00000441642 509 ntBASIC17.29■□□□□ 0.36
CDH17Q12864 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH17Q12864 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.29■□□□□ 0.36
CDH17Q12864 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH17Q12864 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH17Q12864 AC091304.2-201ENST00000564639 760 ntBASIC17.29■□□□□ 0.36
CDH17Q12864 MTDHP3-201ENST00000594186 672 ntBASIC17.29■□□□□ 0.36
CDH17Q12864 AL353135.1-201ENST00000606729 504 ntBASIC17.29■□□□□ 0.36
CDH17Q12864 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH17Q12864 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH17Q12864 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDH17Q12864 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms