Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX6-1P78426 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.15■□□□□ 0.02
NKX6-1P78426 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX6-1P78426 NKAPP1-205ENST00000585790 367 ntBASIC15.15■□□□□ 0.02
NKX6-1P78426 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.15■□□□□ 0.02
NKX6-1P78426 AC073592.4-201ENST00000623827 446 ntBASIC15.15■□□□□ 0.02
NKX6-1P78426 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX6-1P78426 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.15■□□□□ 0.02
NKX6-1P78426 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NKX6-1P78426 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NKX6-1P78426 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NKX6-1P78426 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 AC067852.2-201ENST00000590513 2313 ntBASIC15.15■□□□□ 0.02
NKX6-1P78426 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 KRT18P28-201ENST00000453838 1332 ntBASIC15.15■□□□□ 0.02
NKX6-1P78426 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-1P78426 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-1P78426 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-1P78426 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-1P78426 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
NKX6-1P78426 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-1P78426 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NKX6-1P78426 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-1P78426 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 AC002558.1-201ENST00000488906 803 ntBASIC15.14■□□□□ 0.01
NKX6-1P78426 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.14■□□□□ 0.01
NKX6-1P78426 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.14■□□□□ 0.01
NKX6-1P78426 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-1P78426 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.14■□□□□ 0.01
NKX6-1P78426 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-1P78426 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-1P78426 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NKX6-1P78426 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-1P78426 AC079776.2-201ENST00000641154 1609 ntBASIC15.14■□□□□ 0.01
NKX6-1P78426 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
NKX6-1P78426 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
NKX6-1P78426 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX6-1P78426 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 SIGLEC16-201ENST00000599858 1437 ntBASIC15.13■□□□□ 0.01
NKX6-1P78426 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX6-1P78426 AL596442.2-201ENST00000610240 980 ntBASIC15.13■□□□□ 0.01
NKX6-1P78426 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX6-1P78426 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX6-1P78426 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 AC073592.5-201ENST00000624854 528 ntBASIC15.13■□□□□ 0.01
NKX6-1P78426 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX6-1P78426 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-1P78426 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms