Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.28■□□□□ 0.2
SKP1P63208 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.28■□□□□ 0.2
SKP1P63208 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.28■□□□□ 0.2
SKP1P63208 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.28■□□□□ 0.2
SKP1P63208 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 RPS15P9-201ENST00000494093 319 ntBASIC16.28■□□□□ 0.2
SKP1P63208 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.28■□□□□ 0.2
SKP1P63208 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SKP1P63208 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.28■□□□□ 0.2
SKP1P63208 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SKP1P63208 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
SKP1P63208 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.27■□□□□ 0.2
SKP1P63208 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.27■□□□□ 0.2
SKP1P63208 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.27■□□□□ 0.2
SKP1P63208 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.27■□□□□ 0.2
SKP1P63208 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.27■□□□□ 0.2
SKP1P63208 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SKP1P63208 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SKP1P63208 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SKP1P63208 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SKP1P63208 AC006504.4-201ENST00000592118 1568 ntBASIC16.27■□□□□ 0.2
SKP1P63208 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.27■□□□□ 0.2
SKP1P63208 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SKP1P63208 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.27■□□□□ 0.2
SKP1P63208 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SKP1P63208 AC073621.1-201ENST00000392730 636 ntBASIC16.27■□□□□ 0.2
SKP1P63208 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SKP1P63208 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.27■□□□□ 0.2
SKP1P63208 RNA5SP419-201ENST00000515908 135 ntBASIC16.27■□□□□ 0.2
SKP1P63208 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.27■□□□□ 0.2
SKP1P63208 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SKP1P63208 AC008667.4-201ENST00000607370 168 ntBASIC16.27■□□□□ 0.2
SKP1P63208 BX640515.1-201ENST00000617215 977 ntBASIC16.27■□□□□ 0.2
SKP1P63208 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.27■□□□□ 0.2
SKP1P63208 AC116407.3-201ENST00000623905 1129 ntBASIC16.27■□□□□ 0.2
SKP1P63208 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.27■□□□□ 0.2
SKP1P63208 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SKP1P63208 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
SKP1P63208 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SKP1P63208 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SKP1P63208 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.27■□□□□ 0.19
SKP1P63208 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
SKP1P63208 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.27■□□□□ 0.19
SKP1P63208 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SKP1P63208 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SKP1P63208 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SKP1P63208 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SKP1P63208 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
SKP1P63208 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.26■□□□□ 0.19
SKP1P63208 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.26■□□□□ 0.19
SKP1P63208 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.26■□□□□ 0.19
SKP1P63208 PI4KAP1-204ENST00000612579 1703 ntBASIC16.26■□□□□ 0.19
SKP1P63208 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SKP1P63208 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 AL590627.1-203ENST00000421194 1026 ntBASIC16.26■□□□□ 0.19
SKP1P63208 AC098831.1-202ENST00000438821 336 ntBASIC16.26■□□□□ 0.19
SKP1P63208 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.26■□□□□ 0.19
SKP1P63208 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.26■□□□□ 0.19
SKP1P63208 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SKP1P63208 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SKP1P63208 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SKP1P63208 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.26■□□□□ 0.19
SKP1P63208 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SKP1P63208 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms