Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS3P61009 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS3P61009 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS3P61009 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS3P61009 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.01□□□□□ -0.17
SPCS3P61009 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.01□□□□□ -0.17
SPCS3P61009 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SPCS3P61009 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.01□□□□□ -0.17
SPCS3P61009 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SPCS3P61009 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.01□□□□□ -0.17
SPCS3P61009 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SPCS3P61009 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.01□□□□□ -0.17
SPCS3P61009 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SPCS3P61009 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.01□□□□□ -0.17
SPCS3P61009 ZNF444P1-201ENST00000559497 298 ntBASIC14.01□□□□□ -0.17
SPCS3P61009 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.01□□□□□ -0.17
SPCS3P61009 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.01□□□□□ -0.17
SPCS3P61009 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.01□□□□□ -0.17
SPCS3P61009 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SPCS3P61009 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SPCS3P61009 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS3P61009 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SPCS3P61009 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14□□□□□ -0.17
SPCS3P61009 FLJ16779-201ENST00000612722 7638 ntBASIC14□□□□□ -0.17
SPCS3P61009 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SPCS3P61009 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14□□□□□ -0.17
SPCS3P61009 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14□□□□□ -0.17
SPCS3P61009 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14□□□□□ -0.17
SPCS3P61009 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 ANKRD20A18P-201ENST00000359341 492 ntBASIC14□□□□□ -0.17
SPCS3P61009 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14□□□□□ -0.17
SPCS3P61009 STARP1-201ENST00000397973 869 ntBASIC14□□□□□ -0.17
SPCS3P61009 CD70-202ENST00000423145 881 ntTSL 2 BASIC14□□□□□ -0.17
SPCS3P61009 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14□□□□□ -0.17
SPCS3P61009 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14□□□□□ -0.17
SPCS3P61009 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14□□□□□ -0.17
SPCS3P61009 IGHV3-52-201ENST00000519770 353 ntBASIC14□□□□□ -0.17
SPCS3P61009 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14□□□□□ -0.17
SPCS3P61009 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14□□□□□ -0.17
SPCS3P61009 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14□□□□□ -0.17
SPCS3P61009 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SPCS3P61009 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SPCS3P61009 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14□□□□□ -0.17
SPCS3P61009 AC104581.4-201ENST00000623126 3052 ntBASIC14□□□□□ -0.17
SPCS3P61009 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14□□□□□ -0.17
SPCS3P61009 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SPCS3P61009 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SPCS3P61009 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.99□□□□□ -0.17
SPCS3P61009 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms