Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 AC233263.1-201ENST00000578059 224 ntBASIC13.37□□□□□ -0.27
ERVFC1-1P60608 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.37□□□□□ -0.27
ERVFC1-1P60608 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 SBF1P1-201ENST00000444527 5631 ntBASIC13.37□□□□□ -0.27
ERVFC1-1P60608 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 AC092384.3-202ENST00000564646 2873 ntBASIC13.37□□□□□ -0.27
ERVFC1-1P60608 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ERVFC1-1P60608 RNF216P1-203ENST00000404404 2427 ntBASIC13.37□□□□□ -0.27
ERVFC1-1P60608 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 AL596275.1-201ENST00000423464 877 ntBASIC13.36□□□□□ -0.27
ERVFC1-1P60608 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 MIR3180-5-201ENST00000583743 153 ntBASIC13.36□□□□□ -0.27
ERVFC1-1P60608 AP001412.1-201ENST00000608405 714 ntBASIC13.36□□□□□ -0.27
ERVFC1-1P60608 AC011298.2-201ENST00000617989 482 ntBASIC13.36□□□□□ -0.27
ERVFC1-1P60608 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms