Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH11P55287 DOC2GP-204ENST00000639052 2548 ntBASIC15.74■□□□□ 0.11
CDH11P55287 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH11P55287 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH11P55287 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH11P55287 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDH11P55287 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 PCDH8P1-201ENST00000428983 2773 ntBASIC15.74■□□□□ 0.11
CDH11P55287 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
CDH11P55287 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDH11P55287 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CDH11P55287 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH11P55287 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH11P55287 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH11P55287 TSPY12P-201ENST00000421279 868 ntBASIC15.74■□□□□ 0.11
CDH11P55287 NUS1P1-201ENST00000446295 882 ntBASIC15.74■□□□□ 0.11
CDH11P55287 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH11P55287 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CDH11P55287 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH11P55287 AC074051.2-201ENST00000565115 352 ntBASIC15.74■□□□□ 0.11
CDH11P55287 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH11P55287 Z69720.1-201ENST00000601483 472 ntBASIC15.74■□□□□ 0.11
CDH11P55287 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH11P55287 AC004263.2-201ENST00000617183 678 ntBASIC15.74■□□□□ 0.11
CDH11P55287 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
CDH11P55287 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH11P55287 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.74■□□□□ 0.11
CDH11P55287 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDH11P55287 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH11P55287 AL353692.3-201ENST00000407031 1396 ntBASIC15.74■□□□□ 0.11
CDH11P55287 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH11P55287 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH11P55287 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH11P55287 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CDH11P55287 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 AL603756.1-201ENST00000606511 2163 ntBASIC15.73■□□□□ 0.11
CDH11P55287 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH11P55287 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH11P55287 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDH11P55287 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH11P55287 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH11P55287 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH11P55287 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH11P55287 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH11P55287 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH11P55287 AC124864.1-201ENST00000623408 392 ntBASIC15.73■□□□□ 0.11
CDH11P55287 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CDH11P55287 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH11P55287 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDH11P55287 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CDH11P55287 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDH11P55287 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH11P55287 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CDH11P55287 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CDH11P55287 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH11P55287 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH11P55287 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH11P55287 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms