Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HADHBP55084 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 ME2P1-201ENST00000426028 1970 ntBASIC17.9■□□□□ 0.46
HADHBP55084 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HADHBP55084 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
HADHBP55084 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.9■□□□□ 0.46
HADHBP55084 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.9■□□□□ 0.46
HADHBP55084 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.9■□□□□ 0.46
HADHBP55084 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HADHBP55084 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.9■□□□□ 0.46
HADHBP55084 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
HADHBP55084 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HADHBP55084 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 AC243591.1-201ENST00000452967 1364 ntBASIC17.9■□□□□ 0.46
HADHBP55084 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HADHBP55084 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.9■□□□□ 0.46
HADHBP55084 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHBP55084 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HADHBP55084 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.89■□□□□ 0.46
HADHBP55084 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HADHBP55084 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.89■□□□□ 0.46
HADHBP55084 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HADHBP55084 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHBP55084 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHBP55084 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.89■□□□□ 0.45
HADHBP55084 MTHFR-217ENST00000641820 1569 ntBASIC17.89■□□□□ 0.45
HADHBP55084 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HADHBP55084 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.89■□□□□ 0.45
HADHBP55084 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHBP55084 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.89■□□□□ 0.45
HADHBP55084 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.89■□□□□ 0.45
HADHBP55084 FAM210CP-201ENST00000445714 574 ntBASIC17.89■□□□□ 0.45
HADHBP55084 AP000867.3-201ENST00000524675 377 ntBASIC17.89■□□□□ 0.45
HADHBP55084 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHBP55084 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
HADHBP55084 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHBP55084 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.89■□□□□ 0.45
HADHBP55084 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 AC099336.1-202ENST00000602961 463 ntBASIC17.89■□□□□ 0.45
HADHBP55084 AC006277.1-201ENST00000624348 1610 ntBASIC17.89■□□□□ 0.45
HADHBP55084 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHBP55084 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HADHBP55084 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
HADHBP55084 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
HADHBP55084 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.89■□□□□ 0.45
HADHBP55084 OR6D1P-202ENST00000641007 5290 ntBASIC17.89■□□□□ 0.45
HADHBP55084 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
HADHBP55084 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHBP55084 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.88■□□□□ 0.45
HADHBP55084 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.88■□□□□ 0.45
HADHBP55084 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.88■□□□□ 0.45
HADHBP55084 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HADHBP55084 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.88■□□□□ 0.45
HADHBP55084 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.88■□□□□ 0.45
HADHBP55084 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.88■□□□□ 0.45
HADHBP55084 AC087388.1-201ENST00000571370 1112 ntBASIC17.88■□□□□ 0.45
HADHBP55084 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.88■□□□□ 0.45
HADHBP55084 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.88■□□□□ 0.45
HADHBP55084 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.88■□□□□ 0.45
HADHBP55084 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 AC069148.1-201ENST00000608741 768 ntBASIC17.88■□□□□ 0.45
HADHBP55084 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.88■□□□□ 0.45
HADHBP55084 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHBP55084 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms