Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LIMK2P53671 AL355877.3-201ENST00000622820 899 ntBASIC17.3■□□□□ 0.36
LIMK2P53671 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIMK2P53671 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LIMK2P53671 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIMK2P53671 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.3■□□□□ 0.36
LIMK2P53671 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.3■□□□□ 0.36
LIMK2P53671 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIMK2P53671 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LIMK2P53671 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIMK2P53671 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.3■□□□□ 0.36
LIMK2P53671 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LIMK2P53671 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
LIMK2P53671 AL353593.2-201ENST00000602529 1483 ntBASIC17.3■□□□□ 0.36
LIMK2P53671 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.3■□□□□ 0.36
LIMK2P53671 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIMK2P53671 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.3■□□□□ 0.36
LIMK2P53671 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LIMK2P53671 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LIMK2P53671 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LIMK2P53671 INTS4P1-201ENST00000438455 1935 ntBASIC17.29■□□□□ 0.36
LIMK2P53671 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.29■□□□□ 0.36
LIMK2P53671 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
LIMK2P53671 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LIMK2P53671 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
LIMK2P53671 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 RBM17P3-201ENST00000417687 1192 ntBASIC17.29■□□□□ 0.36
LIMK2P53671 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LIMK2P53671 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.29■□□□□ 0.36
LIMK2P53671 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 AC011467.2-201ENST00000598425 242 ntBASIC17.29■□□□□ 0.36
LIMK2P53671 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.29■□□□□ 0.36
LIMK2P53671 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.29■□□□□ 0.36
LIMK2P53671 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LIMK2P53671 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
LIMK2P53671 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.29■□□□□ 0.36
LIMK2P53671 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIMK2P53671 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
LIMK2P53671 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.28■□□□□ 0.36
LIMK2P53671 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.28■□□□□ 0.36
LIMK2P53671 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LIMK2P53671 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.28■□□□□ 0.36
LIMK2P53671 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.28■□□□□ 0.36
LIMK2P53671 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.28■□□□□ 0.36
LIMK2P53671 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.28■□□□□ 0.36
LIMK2P53671 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.28■□□□□ 0.36
LIMK2P53671 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.28■□□□□ 0.36
LIMK2P53671 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LIMK2P53671 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.28■□□□□ 0.36
LIMK2P53671 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.28■□□□□ 0.36
LIMK2P53671 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.28■□□□□ 0.36
LIMK2P53671 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.28■□□□□ 0.36
LIMK2P53671 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.28■□□□□ 0.36
LIMK2P53671 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LIMK2P53671 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LIMK2P53671 AC092068.3-201ENST00000587894 2016 ntBASIC17.28■□□□□ 0.36
LIMK2P53671 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIMK2P53671 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LIMK2P53671 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LIMK2P53671 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms