Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.06■□□□□ 0.64
LBX1P52954 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.06■□□□□ 0.64
LBX1P52954 CLK3P2-201ENST00000427566 1453 ntBASIC19.06■□□□□ 0.64
LBX1P52954 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LBX1P52954 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.06■□□□□ 0.64
LBX1P52954 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LBX1P52954 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.06■□□□□ 0.64
LBX1P52954 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LBX1P52954 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.06■□□□□ 0.64
LBX1P52954 ACTG1P17-201ENST00000558391 1119 ntBASIC19.06■□□□□ 0.64
LBX1P52954 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.06■□□□□ 0.64
LBX1P52954 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.06■□□□□ 0.64
LBX1P52954 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LBX1P52954 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.06■□□□□ 0.64
LBX1P52954 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LBX1P52954 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LBX1P52954 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LBX1P52954 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.06■□□□□ 0.64
LBX1P52954 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LBX1P52954 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LBX1P52954 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LBX1P52954 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.05■□□□□ 0.64
LBX1P52954 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.05■□□□□ 0.64
LBX1P52954 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.05■□□□□ 0.64
LBX1P52954 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.05■□□□□ 0.64
LBX1P52954 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.05■□□□□ 0.64
LBX1P52954 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.05■□□□□ 0.64
LBX1P52954 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.05■□□□□ 0.64
LBX1P52954 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
LBX1P52954 AL022328.3-201ENST00000607943 679 ntBASIC19.05■□□□□ 0.64
LBX1P52954 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LBX1P52954 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LBX1P52954 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LBX1P52954 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.04■□□□□ 0.64
LBX1P52954 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.04■□□□□ 0.64
LBX1P52954 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 YBX1P6-201ENST00000442962 1002 ntBASIC19.04■□□□□ 0.64
LBX1P52954 EIF4HP1-201ENST00000453115 687 ntBASIC19.04■□□□□ 0.64
LBX1P52954 UPF3AP2-201ENST00000457924 1132 ntBASIC19.04■□□□□ 0.64
LBX1P52954 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 SDHAP3-202ENST00000515467 728 ntBASIC19.04■□□□□ 0.64
LBX1P52954 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.04■□□□□ 0.64
LBX1P52954 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.04■□□□□ 0.64
LBX1P52954 AC020765.3-201ENST00000613051 740 ntBASIC19.04■□□□□ 0.64
LBX1P52954 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.04■□□□□ 0.64
LBX1P52954 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LBX1P52954 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.03■□□□□ 0.64
LBX1P52954 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.03■□□□□ 0.64
LBX1P52954 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.03■□□□□ 0.64
LBX1P52954 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.03■□□□□ 0.64
LBX1P52954 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.03■□□□□ 0.64
LBX1P52954 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.03■□□□□ 0.64
LBX1P52954 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.03■□□□□ 0.64
LBX1P52954 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.03■□□□□ 0.64
LBX1P52954 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.03■□□□□ 0.64
LBX1P52954 RN7SL560P-201ENST00000577943 264 ntBASIC19.03■□□□□ 0.64
LBX1P52954 SLC22A20-204ENST00000530038 1673 ntBASIC19.03■□□□□ 0.64
LBX1P52954 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LBX1P52954 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms