Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6CP51160 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6CP51160 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 AL590627.1-203ENST00000421194 1026 ntBASIC18.54■□□□□ 0.56
PDE6CP51160 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.54■□□□□ 0.56
PDE6CP51160 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6CP51160 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6CP51160 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.54■□□□□ 0.56
PDE6CP51160 AC120114.3-201ENST00000611923 658 ntBASIC18.54■□□□□ 0.56
PDE6CP51160 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6CP51160 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PDE6CP51160 AL356309.3-201ENST00000624132 1934 ntBASIC18.54■□□□□ 0.56
PDE6CP51160 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PDE6CP51160 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PDE6CP51160 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PDE6CP51160 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.54■□□□□ 0.56
PDE6CP51160 AC060834.1-201ENST00000443027 2032 ntBASIC18.54■□□□□ 0.56
PDE6CP51160 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 AL135999.2-201ENST00000622438 1686 ntBASIC18.54■□□□□ 0.56
PDE6CP51160 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PDE6CP51160 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6CP51160 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6CP51160 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PDE6CP51160 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
PDE6CP51160 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6CP51160 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6CP51160 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.53■□□□□ 0.56
PDE6CP51160 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.53■□□□□ 0.56
PDE6CP51160 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.53■□□□□ 0.56
PDE6CP51160 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6CP51160 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.53■□□□□ 0.56
PDE6CP51160 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PDE6CP51160 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6CP51160 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PDE6CP51160 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PDE6CP51160 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PDE6CP51160 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
PDE6CP51160 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 PMPCAP1-201ENST00000508114 1576 ntBASIC18.52■□□□□ 0.56
PDE6CP51160 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
PDE6CP51160 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.52■□□□□ 0.56
PDE6CP51160 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.52■□□□□ 0.56
PDE6CP51160 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.52■□□□□ 0.56
PDE6CP51160 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.52■□□□□ 0.56
PDE6CP51160 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.52■□□□□ 0.56
PDE6CP51160 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDE6CP51160 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.52■□□□□ 0.56
PDE6CP51160 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.52■□□□□ 0.56
PDE6CP51160 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
PDE6CP51160 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.52■□□□□ 0.56
PDE6CP51160 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.52■□□□□ 0.56
PDE6CP51160 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.52■□□□□ 0.56
PDE6CP51160 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.52■□□□□ 0.56
PDE6CP51160 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
PDE6CP51160 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.52■□□□□ 0.56
PDE6CP51160 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PDE6CP51160 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6CP51160 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDE6CP51160 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.52■□□□□ 0.55
PDE6CP51160 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDE6CP51160 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PDE6CP51160 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDE6CP51160 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms