Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB28P51157 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB28P51157 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB28P51157 AC026471.1-201ENST00000564629 3026 ntBASIC16.52■□□□□ 0.24
RAB28P51157 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB28P51157 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB28P51157 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB28P51157 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB28P51157 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
RAB28P51157 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.52■□□□□ 0.24
RAB28P51157 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB28P51157 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.52■□□□□ 0.24
RAB28P51157 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB28P51157 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB28P51157 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB28P51157 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB28P51157 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB28P51157 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB28P51157 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB28P51157 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAB28P51157 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.52■□□□□ 0.23
RAB28P51157 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RAB28P51157 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.52■□□□□ 0.23
RAB28P51157 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RAB28P51157 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.52■□□□□ 0.23
RAB28P51157 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RAB28P51157 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAB28P51157 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAB28P51157 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RAB28P51157 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB28P51157 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB28P51157 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 AC092053.1-201ENST00000605787 1936 ntBASIC16.51■□□□□ 0.23
RAB28P51157 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB28P51157 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RAB28P51157 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB28P51157 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RAB28P51157 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB28P51157 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RAB28P51157 CRYGEP-201ENST00000412192 528 ntBASIC16.51■□□□□ 0.23
RAB28P51157 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB28P51157 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB28P51157 VN2R19P-201ENST00000442399 1052 ntBASIC16.51■□□□□ 0.23
RAB28P51157 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB28P51157 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB28P51157 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
RAB28P51157 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB28P51157 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB28P51157 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB28P51157 AC002310.6-201ENST00000624451 1377 ntBASIC16.51■□□□□ 0.23
RAB28P51157 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB28P51157 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB28P51157 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB28P51157 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB28P51157 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAB28P51157 AP001094.4-201ENST00000579008 2176 ntBASIC16.5■□□□□ 0.23
RAB28P51157 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB28P51157 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RAB28P51157 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB28P51157 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RAB28P51157 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB28P51157 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RAB28P51157 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB28P51157 SLC25A6P2-201ENST00000497974 877 ntBASIC16.5■□□□□ 0.23
RAB28P51157 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.5■□□□□ 0.23
RAB28P51157 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB28P51157 OR7E47P-204ENST00000575924 449 ntBASIC16.5■□□□□ 0.23
RAB28P51157 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB28P51157 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB28P51157 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB28P51157 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAB28P51157 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB28P51157 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB28P51157 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB28P51157 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB28P51157 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB28P51157 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB28P51157 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB28P51157 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB28P51157 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RAB28P51157 AP000347.1-202ENST00000435868 847 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms