Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TUBP50607 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBP50607 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.07■□□□□ 0.48
TUBP50607 AL135999.2-201ENST00000622438 1686 ntBASIC18.07■□□□□ 0.48
TUBP50607 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBP50607 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.07■□□□□ 0.48
TUBP50607 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.07■□□□□ 0.48
TUBP50607 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.07■□□□□ 0.48
TUBP50607 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.07■□□□□ 0.48
TUBP50607 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBP50607 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TUBP50607 PGAM5P1-201ENST00000518923 814 ntBASIC18.07■□□□□ 0.48
TUBP50607 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.07■□□□□ 0.48
TUBP50607 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.07■□□□□ 0.48
TUBP50607 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBP50607 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.07■□□□□ 0.48
TUBP50607 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TUBP50607 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TUBP50607 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBP50607 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
TUBP50607 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.07■□□□□ 0.48
TUBP50607 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBP50607 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBP50607 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.06■□□□□ 0.48
TUBP50607 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.06■□□□□ 0.48
TUBP50607 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.06■□□□□ 0.48
TUBP50607 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TUBP50607 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TUBP50607 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.06■□□□□ 0.48
TUBP50607 PRSS29P-201ENST00000440800 595 ntBASIC18.06■□□□□ 0.48
TUBP50607 KRT18P3-201ENST00000451602 1288 ntBASIC18.06■□□□□ 0.48
TUBP50607 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.06■□□□□ 0.48
TUBP50607 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.06■□□□□ 0.48
TUBP50607 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.06■□□□□ 0.48
TUBP50607 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TUBP50607 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TUBP50607 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TUBP50607 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TUBP50607 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.06■□□□□ 0.48
TUBP50607 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.06■□□□□ 0.48
TUBP50607 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TUBP50607 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.05■□□□□ 0.48
TUBP50607 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
TUBP50607 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
TUBP50607 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TUBP50607 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TUBP50607 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TUBP50607 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.05■□□□□ 0.48
TUBP50607 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TUBP50607 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TUBP50607 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TUBP50607 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.05■□□□□ 0.48
TUBP50607 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.05■□□□□ 0.48
TUBP50607 AC108073.2-201ENST00000464002 357 ntBASIC18.05■□□□□ 0.48
TUBP50607 RNA5SP416-201ENST00000516838 111 ntBASIC18.05■□□□□ 0.48
TUBP50607 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.05■□□□□ 0.48
TUBP50607 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.05■□□□□ 0.48
TUBP50607 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.05■□□□□ 0.48
TUBP50607 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.05■□□□□ 0.48
TUBP50607 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TUBP50607 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TUBP50607 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TUBP50607 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TUBP50607 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.05■□□□□ 0.48
TUBP50607 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TUBP50607 LYSMD4-203ENST00000378904 2122 ntBASIC18.05■□□□□ 0.48
TUBP50607 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TUBP50607 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.05■□□□□ 0.48
TUBP50607 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TUBP50607 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.05■□□□□ 0.48
TUBP50607 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TUBP50607 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.04■□□□□ 0.48
TUBP50607 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TUBP50607 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TUBP50607 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
TUBP50607 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TUBP50607 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
TUBP50607 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.04■□□□□ 0.48
TUBP50607 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TUBP50607 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 MIR940-201ENST00000401276 94 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms