Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.84■□□□□ 0.45
MMP13P45452 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP13P45452 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
MMP13P45452 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.84■□□□□ 0.45
MMP13P45452 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP13P45452 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP13P45452 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.84■□□□□ 0.45
MMP13P45452 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.84■□□□□ 0.45
MMP13P45452 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.84■□□□□ 0.45
MMP13P45452 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.84■□□□□ 0.45
MMP13P45452 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
MMP13P45452 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP13P45452 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.84■□□□□ 0.45
MMP13P45452 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MMP13P45452 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.83■□□□□ 0.45
MMP13P45452 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
MMP13P45452 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP13P45452 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP13P45452 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
MMP13P45452 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.83■□□□□ 0.45
MMP13P45452 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.83■□□□□ 0.45
MMP13P45452 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP13P45452 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MMP13P45452 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP13P45452 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP13P45452 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP13P45452 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP13P45452 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
MMP13P45452 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.83■□□□□ 0.44
MMP13P45452 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
MMP13P45452 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.83■□□□□ 0.44
MMP13P45452 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.83■□□□□ 0.44
MMP13P45452 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.83■□□□□ 0.44
MMP13P45452 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.83■□□□□ 0.44
MMP13P45452 ABCD1P5-201ENST00000445663 754 ntBASIC17.83■□□□□ 0.44
MMP13P45452 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.83■□□□□ 0.44
MMP13P45452 AC132008.2-207ENST00000454517 770 ntBASIC17.83■□□□□ 0.44
MMP13P45452 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.83■□□□□ 0.44
MMP13P45452 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.83■□□□□ 0.44
MMP13P45452 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.83■□□□□ 0.44
MMP13P45452 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.83■□□□□ 0.44
MMP13P45452 STK25P1-201ENST00000585406 838 ntBASIC17.83■□□□□ 0.44
MMP13P45452 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 AC073592.5-201ENST00000624854 528 ntBASIC17.83■□□□□ 0.44
MMP13P45452 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.83■□□□□ 0.44
MMP13P45452 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.83■□□□□ 0.44
MMP13P45452 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.83■□□□□ 0.44
MMP13P45452 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.83■□□□□ 0.44
MMP13P45452 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
MMP13P45452 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP13P45452 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
MMP13P45452 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.82■□□□□ 0.44
MMP13P45452 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
MMP13P45452 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.82■□□□□ 0.44
MMP13P45452 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.82■□□□□ 0.44
MMP13P45452 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
MMP13P45452 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.82■□□□□ 0.44
MMP13P45452 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.82■□□□□ 0.44
MMP13P45452 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.82■□□□□ 0.44
MMP13P45452 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms