Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.72■□□□□ 0.11
RFC3P40938 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC3P40938 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFC3P40938 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RFC3P40938 LINC00304-203ENST00000565008 1864 ntBASIC15.71■□□□□ 0.11
RFC3P40938 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC3P40938 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.71■□□□□ 0.11
RFC3P40938 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC3P40938 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RFC3P40938 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC3P40938 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC3P40938 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC3P40938 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC3P40938 MRPL20P1-201ENST00000400819 433 ntBASIC15.71■□□□□ 0.11
RFC3P40938 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.71■□□□□ 0.11
RFC3P40938 HCG4B-203ENST00000450128 991 ntBASIC15.71■□□□□ 0.11
RFC3P40938 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC3P40938 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.71■□□□□ 0.11
RFC3P40938 AL139327.4-201ENST00000612362 153 ntBASIC15.71■□□□□ 0.11
RFC3P40938 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC3P40938 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC3P40938 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFC3P40938 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.71■□□□□ 0.1
RFC3P40938 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFC3P40938 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.71■□□□□ 0.1
RFC3P40938 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFC3P40938 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RFC3P40938 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC3P40938 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RFC3P40938 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 IGLL3P-201ENST00000412472 434 ntBASIC15.7■□□□□ 0.1
RFC3P40938 AC004832.2-201ENST00000426397 482 ntBASIC15.7■□□□□ 0.1
RFC3P40938 DNAJB3-201ENST00000446806 729 ntBASIC15.7■□□□□ 0.1
RFC3P40938 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC3P40938 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.7■□□□□ 0.1
RFC3P40938 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC3P40938 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 AC084018.2-201ENST00000613093 2607 ntBASIC15.7■□□□□ 0.1
RFC3P40938 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC3P40938 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
RFC3P40938 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RFC3P40938 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC3P40938 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RFC3P40938 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC3P40938 LYSMD4-203ENST00000378904 2122 ntBASIC15.7■□□□□ 0.1
RFC3P40938 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
RFC3P40938 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC3P40938 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC3P40938 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 AC067852.2-201ENST00000590513 2313 ntBASIC15.69■□□□□ 0.1
RFC3P40938 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RFC3P40938 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC3P40938 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 AP002414.1-201ENST00000391405 1147 ntBASIC15.69■□□□□ 0.1
RFC3P40938 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC3P40938 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC3P40938 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.69■□□□□ 0.1
RFC3P40938 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC3P40938 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC3P40938 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.69■□□□□ 0.1
RFC3P40938 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms