Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.92■□□□□ 0.94
PDE6BP35913 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.92■□□□□ 0.94
PDE6BP35913 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.92■□□□□ 0.94
PDE6BP35913 AC142381.1-201ENST00000426099 345 ntBASIC20.92■□□□□ 0.94
PDE6BP35913 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 KRT17P7-201ENST00000451704 1104 ntBASIC20.92■□□□□ 0.94
PDE6BP35913 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PDE6BP35913 AC105233.2-201ENST00000523697 349 ntBASIC20.92■□□□□ 0.94
PDE6BP35913 AF228730.5-201ENST00000530288 346 ntBASIC20.92■□□□□ 0.94
PDE6BP35913 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.92■□□□□ 0.94
PDE6BP35913 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.92■□□□□ 0.94
PDE6BP35913 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.92■□□□□ 0.94
PDE6BP35913 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.92■□□□□ 0.94
PDE6BP35913 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.92■□□□□ 0.94
PDE6BP35913 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.92■□□□□ 0.94
PDE6BP35913 AL138828.2-201ENST00000615812 383 ntBASIC20.92■□□□□ 0.94
PDE6BP35913 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.92■□□□□ 0.94
PDE6BP35913 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PDE6BP35913 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PDE6BP35913 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE6BP35913 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PDE6BP35913 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PDE6BP35913 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.91■□□□□ 0.94
PDE6BP35913 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE6BP35913 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE6BP35913 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE6BP35913 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PDE6BP35913 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.91■□□□□ 0.94
PDE6BP35913 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
PDE6BP35913 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PDE6BP35913 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE6BP35913 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE6BP35913 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE6BP35913 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PDE6BP35913 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE6BP35913 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE6BP35913 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDE6BP35913 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PDE6BP35913 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDE6BP35913 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE6BP35913 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE6BP35913 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE6BP35913 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE6BP35913 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE6BP35913 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.91■□□□□ 0.94
PDE6BP35913 AP3S2-216ENST00000617003 1561 ntBASIC20.91■□□□□ 0.94
PDE6BP35913 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE6BP35913 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PDE6BP35913 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE6BP35913 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PDE6BP35913 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.9■□□□□ 0.94
PDE6BP35913 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.9■□□□□ 0.94
PDE6BP35913 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PDE6BP35913 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.9■□□□□ 0.94
PDE6BP35913 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PDE6BP35913 HLA-V-204ENST00000476601 1289 ntBASIC20.9■□□□□ 0.94
PDE6BP35913 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.9■□□□□ 0.94
PDE6BP35913 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.9■□□□□ 0.94
PDE6BP35913 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.9■□□□□ 0.94
PDE6BP35913 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.9■□□□□ 0.94
PDE6BP35913 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
PDE6BP35913 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.9■□□□□ 0.94
PDE6BP35913 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
PDE6BP35913 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.9■□□□□ 0.94
PDE6BP35913 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.9■□□□□ 0.94
PDE6BP35913 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.9■□□□□ 0.94
PDE6BP35913 AC090164.3-201ENST00000610780 2143 ntBASIC20.9■□□□□ 0.94
PDE6BP35913 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.9■□□□□ 0.94
PDE6BP35913 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PDE6BP35913 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.9■□□□□ 0.94
PDE6BP35913 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6BP35913 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDE6BP35913 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.89■□□□□ 0.94
PDE6BP35913 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.89■□□□□ 0.94
PDE6BP35913 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDE6BP35913 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDE6BP35913 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.89■□□□□ 0.93
PDE6BP35913 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms