Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.08■□□□□ 0.48
RFC1P35251 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC1P35251 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RFC1P35251 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC1P35251 LINC00982-205ENST00000420957 435 ntBASIC18.08■□□□□ 0.48
RFC1P35251 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RFC1P35251 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.08■□□□□ 0.48
RFC1P35251 FGFR3P6-201ENST00000457012 610 ntBASIC18.08■□□□□ 0.48
RFC1P35251 UNC93B7-201ENST00000509439 705 ntBASIC18.08■□□□□ 0.48
RFC1P35251 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFC1P35251 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.08■□□□□ 0.48
RFC1P35251 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC1P35251 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.08■□□□□ 0.48
RFC1P35251 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFC1P35251 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RFC1P35251 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.08■□□□□ 0.48
RFC1P35251 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC1P35251 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.48
RFC1P35251 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC1P35251 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.08■□□□□ 0.48
RFC1P35251 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.08■□□□□ 0.48
RFC1P35251 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC1P35251 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.07■□□□□ 0.48
RFC1P35251 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC1P35251 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RFC1P35251 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC1P35251 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.07■□□□□ 0.48
RFC1P35251 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 AF238378.1-201ENST00000526806 358 ntBASIC18.07■□□□□ 0.48
RFC1P35251 SART3-203ENST00000546611 1184 ntBASIC18.07■□□□□ 0.48
RFC1P35251 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.07■□□□□ 0.48
RFC1P35251 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RFC1P35251 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.07■□□□□ 0.48
RFC1P35251 AC064862.7-201ENST00000604520 867 ntBASIC18.07■□□□□ 0.48
RFC1P35251 AC008608.2-201ENST00000606089 416 ntBASIC18.07■□□□□ 0.48
RFC1P35251 AL139288.1-201ENST00000623748 933 ntBASIC18.07■□□□□ 0.48
RFC1P35251 AL022326.1-202ENST00000641533 845 ntBASIC18.07■□□□□ 0.48
RFC1P35251 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RFC1P35251 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RFC1P35251 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RFC1P35251 NKILA-202ENST00000614771 2598 ntBASIC18.07■□□□□ 0.48
RFC1P35251 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 AC106886.4-201ENST00000623557 2502 ntBASIC18.07■□□□□ 0.48
RFC1P35251 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
RFC1P35251 GPR89P-201ENST00000407924 1495 ntBASIC18.07■□□□□ 0.48
RFC1P35251 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC1P35251 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC1P35251 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 AC011676.5-201ENST00000624864 2660 ntBASIC18.06■□□□□ 0.48
RFC1P35251 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RFC1P35251 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.06■□□□□ 0.48
RFC1P35251 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.06■□□□□ 0.48
RFC1P35251 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RFC1P35251 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.06■□□□□ 0.48
RFC1P35251 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.06■□□□□ 0.48
RFC1P35251 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.06■□□□□ 0.48
RFC1P35251 IFNL4P1-201ENST00000607083 540 ntBASIC18.06■□□□□ 0.48
RFC1P35251 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RFC1P35251 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RFC1P35251 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms