Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
XPAP23025 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
XPAP23025 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.3■□□□□ 0.36
XPAP23025 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XPAP23025 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.3■□□□□ 0.36
XPAP23025 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XPAP23025 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
XPAP23025 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XPAP23025 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.3■□□□□ 0.36
XPAP23025 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.3■□□□□ 0.36
XPAP23025 AL590787.1-201ENST00000568856 1315 ntBASIC17.3■□□□□ 0.36
XPAP23025 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
XPAP23025 CRYGEP-201ENST00000412192 528 ntBASIC17.3■□□□□ 0.36
XPAP23025 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.3■□□□□ 0.36
XPAP23025 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.3■□□□□ 0.36
XPAP23025 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.3■□□□□ 0.36
XPAP23025 AC034105.1-201ENST00000563488 319 ntBASIC17.3■□□□□ 0.36
XPAP23025 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XPAP23025 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
XPAP23025 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XPAP23025 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XPAP23025 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
XPAP23025 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.3■□□□□ 0.36
XPAP23025 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.3■□□□□ 0.36
XPAP23025 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
XPAP23025 AC067852.2-201ENST00000590513 2313 ntBASIC17.3■□□□□ 0.36
XPAP23025 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.29■□□□□ 0.36
XPAP23025 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.29■□□□□ 0.36
XPAP23025 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.29■□□□□ 0.36
XPAP23025 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.29■□□□□ 0.36
XPAP23025 MRPL20P1-201ENST00000400819 433 ntBASIC17.29■□□□□ 0.36
XPAP23025 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.29■□□□□ 0.36
XPAP23025 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.29■□□□□ 0.36
XPAP23025 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 AL591424.1-201ENST00000442569 1213 ntBASIC17.29■□□□□ 0.36
XPAP23025 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 AC108073.2-201ENST00000464002 357 ntBASIC17.29■□□□□ 0.36
XPAP23025 POLD2P1-201ENST00000511220 997 ntBASIC17.29■□□□□ 0.36
XPAP23025 IGHV3-65-201ENST00000523210 341 ntBASIC17.29■□□□□ 0.36
XPAP23025 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.29■□□□□ 0.36
XPAP23025 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.29■□□□□ 0.36
XPAP23025 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.29■□□□□ 0.36
XPAP23025 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.29■□□□□ 0.36
XPAP23025 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.29■□□□□ 0.36
XPAP23025 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
XPAP23025 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.29■□□□□ 0.36
XPAP23025 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.29■□□□□ 0.36
XPAP23025 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
XPAP23025 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
XPAP23025 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
XPAP23025 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
XPAP23025 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
XPAP23025 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
XPAP23025 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.28■□□□□ 0.36
XPAP23025 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
XPAP23025 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
XPAP23025 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
XPAP23025 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XPAP23025 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
XPAP23025 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
XPAP23025 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
XPAP23025 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.28■□□□□ 0.36
XPAP23025 AC007967.2-201ENST00000432613 625 ntBASIC17.28■□□□□ 0.36
XPAP23025 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.28■□□□□ 0.36
XPAP23025 RNA5SP416-201ENST00000516838 111 ntBASIC17.28■□□□□ 0.36
XPAP23025 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.28■□□□□ 0.36
XPAP23025 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.28■□□□□ 0.36
XPAP23025 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.28■□□□□ 0.36
XPAP23025 AC140113.2-201ENST00000604370 208 ntBASIC17.28■□□□□ 0.36
XPAP23025 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XPAP23025 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
XPAP23025 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.28■□□□□ 0.36
XPAP23025 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
XPAP23025 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XPAP23025 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XPAP23025 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
XPAP23025 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XPAP23025 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XPAP23025 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
XPAP23025 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
XPAP23025 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XPAP23025 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
XPAP23025 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XPAP23025 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
XPAP23025 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
XPAP23025 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
XPAP23025 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms