Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFX1P22670 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
RFX1P22670 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX1P22670 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RFX1P22670 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX1P22670 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RFX1P22670 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX1P22670 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX1P22670 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RFX1P22670 RCN1P2-201ENST00000398357 915 ntBASIC18.67■□□□□ 0.58
RFX1P22670 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.67■□□□□ 0.58
RFX1P22670 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RFX1P22670 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX1P22670 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX1P22670 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.67■□□□□ 0.58
RFX1P22670 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.67■□□□□ 0.58
RFX1P22670 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.67■□□□□ 0.58
RFX1P22670 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.67■□□□□ 0.58
RFX1P22670 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.67■□□□□ 0.58
RFX1P22670 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.67■□□□□ 0.58
RFX1P22670 AC055717.3-201ENST00000622967 595 ntBASIC18.67■□□□□ 0.58
RFX1P22670 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX1P22670 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX1P22670 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RFX1P22670 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX1P22670 AC060834.1-201ENST00000443027 2032 ntBASIC18.67■□□□□ 0.58
RFX1P22670 PMPCAP1-201ENST00000508114 1576 ntBASIC18.67■□□□□ 0.58
RFX1P22670 AC012313.1-201ENST00000593393 3059 ntBASIC18.67■□□□□ 0.58
RFX1P22670 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX1P22670 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX1P22670 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RFX1P22670 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.66■□□□□ 0.58
RFX1P22670 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RFX1P22670 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.66■□□□□ 0.58
RFX1P22670 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.66■□□□□ 0.58
RFX1P22670 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RFX1P22670 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 AC092910.1-201ENST00000482027 1129 ntBASIC18.66■□□□□ 0.58
RFX1P22670 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RFX1P22670 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.66■□□□□ 0.58
RFX1P22670 AC027796.2-201ENST00000575326 344 ntBASIC18.66■□□□□ 0.58
RFX1P22670 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.66■□□□□ 0.58
RFX1P22670 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 LINC02084-201ENST00000606069 1096 ntBASIC18.66■□□□□ 0.58
RFX1P22670 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.66■□□□□ 0.58
RFX1P22670 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFX1P22670 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.66■□□□□ 0.58
RFX1P22670 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RFX1P22670 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX1P22670 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.65■□□□□ 0.58
RFX1P22670 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.65■□□□□ 0.58
RFX1P22670 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
RFX1P22670 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.65■□□□□ 0.58
RFX1P22670 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFX1P22670 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.65■□□□□ 0.58
RFX1P22670 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.65■□□□□ 0.58
RFX1P22670 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
RFX1P22670 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.65■□□□□ 0.58
RFX1P22670 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.65■□□□□ 0.58
RFX1P22670 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 PCDHA12-202ENST00000613593 2588 ntBASIC18.65■□□□□ 0.58
RFX1P22670 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX1P22670 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFX1P22670 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFX1P22670 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
RFX1P22670 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.64■□□□□ 0.57
RFX1P22670 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms