Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.63■□□□□ 0.41
ERCC2P18074 PTCHD3P3-201ENST00000403073 906 ntBASIC17.63■□□□□ 0.41
ERCC2P18074 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ERCC2P18074 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.63■□□□□ 0.41
ERCC2P18074 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
ERCC2P18074 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
ERCC2P18074 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.63■□□□□ 0.41
ERCC2P18074 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC2P18074 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.63■□□□□ 0.41
ERCC2P18074 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ERCC2P18074 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.63■□□□□ 0.41
ERCC2P18074 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.63■□□□□ 0.41
ERCC2P18074 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC2P18074 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC2P18074 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
ERCC2P18074 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ERCC2P18074 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ERCC2P18074 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC2P18074 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 AC073621.1-201ENST00000392730 636 ntBASIC17.62■□□□□ 0.41
ERCC2P18074 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ERCC2P18074 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC2P18074 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC2P18074 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.62■□□□□ 0.41
ERCC2P18074 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC2P18074 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC2P18074 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.62■□□□□ 0.41
ERCC2P18074 AC012640.2-201ENST00000561606 901 ntBASIC17.62■□□□□ 0.41
ERCC2P18074 AC008735.5-201ENST00000623544 497 ntBASIC17.62■□□□□ 0.41
ERCC2P18074 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC2P18074 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 AC005915.1-201ENST00000624912 2018 ntBASIC17.62■□□□□ 0.41
ERCC2P18074 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC2P18074 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC2P18074 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 PKD1P1-201ENST00000458669 6805 ntBASIC17.61■□□□□ 0.41
ERCC2P18074 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC2P18074 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.61■□□□□ 0.41
ERCC2P18074 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 MRPL3P1-201ENST00000400109 1033 ntBASIC17.61■□□□□ 0.41
ERCC2P18074 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.61■□□□□ 0.41
ERCC2P18074 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.61■□□□□ 0.41
ERCC2P18074 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC2P18074 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.61■□□□□ 0.41
ERCC2P18074 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 TERC-201ENST00000602385 541 ntBASIC17.61■□□□□ 0.41
ERCC2P18074 FAM215A-202ENST00000632077 792 ntBASIC17.61■□□□□ 0.41
ERCC2P18074 AC105020.1-201ENST00000435356 2205 ntBASIC17.61■□□□□ 0.41
ERCC2P18074 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC2P18074 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ERCC2P18074 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ERCC2P18074 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC2P18074 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ERCC2P18074 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC2P18074 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ERCC2P18074 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC2P18074 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms