Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNB2P17787 AL139424.1-201ENST00000607572 797 ntBASIC18.15■□□□□ 0.5
CHRNB2P17787 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNB2P17787 AL589182.2-201ENST00000619332 1049 ntBASIC18.15■□□□□ 0.5
CHRNB2P17787 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNB2P17787 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNB2P17787 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNB2P17787 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNB2P17787 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNB2P17787 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHRNB2P17787 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CHRNB2P17787 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNB2P17787 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CHRNB2P17787 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
CHRNB2P17787 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHRNB2P17787 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.14■□□□□ 0.5
CHRNB2P17787 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHRNB2P17787 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNB2P17787 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB2P17787 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB2P17787 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.14■□□□□ 0.49
CHRNB2P17787 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.14■□□□□ 0.49
CHRNB2P17787 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.14■□□□□ 0.49
CHRNB2P17787 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNB2P17787 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.14■□□□□ 0.49
CHRNB2P17787 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.14■□□□□ 0.49
CHRNB2P17787 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNB2P17787 AC021087.4-201ENST00000563761 564 ntBASIC18.14■□□□□ 0.49
CHRNB2P17787 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNB2P17787 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CHRNB2P17787 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHRNB2P17787 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.14■□□□□ 0.49
CHRNB2P17787 AC025062.2-201ENST00000605477 670 ntBASIC18.14■□□□□ 0.49
CHRNB2P17787 PCDHB19P-201ENST00000570871 2371 ntBASIC18.14■□□□□ 0.49
CHRNB2P17787 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHRNB2P17787 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHRNB2P17787 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CHRNB2P17787 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
CHRNB2P17787 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNB2P17787 TUBB8P12-201ENST00000308911 1335 ntBASIC18.14■□□□□ 0.49
CHRNB2P17787 TUBB7P-202ENST00000428444 1305 ntBASIC18.14■□□□□ 0.49
CHRNB2P17787 TUBB8P7-204ENST00000567960 1332 ntBASIC18.14■□□□□ 0.49
CHRNB2P17787 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.14■□□□□ 0.49
CHRNB2P17787 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB2P17787 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB2P17787 AL603756.1-201ENST00000606511 2163 ntBASIC18.14■□□□□ 0.49
CHRNB2P17787 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB2P17787 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNB2P17787 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB2P17787 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB2P17787 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB2P17787 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB2P17787 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB2P17787 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB2P17787 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
CHRNB2P17787 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB2P17787 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB2P17787 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB2P17787 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CHRNB2P17787 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB2P17787 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB2P17787 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.13■□□□□ 0.49
CHRNB2P17787 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.13■□□□□ 0.49
CHRNB2P17787 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 SAPCD2P3-201ENST00000455031 850 ntBASIC18.13■□□□□ 0.49
CHRNB2P17787 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.13■□□□□ 0.49
CHRNB2P17787 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.13■□□□□ 0.49
CHRNB2P17787 IFNL4P1-201ENST00000607083 540 ntBASIC18.13■□□□□ 0.49
CHRNB2P17787 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
CHRNB2P17787 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB2P17787 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.13■□□□□ 0.49
CHRNB2P17787 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB2P17787 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRNB2P17787 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
CHRNB2P17787 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNB2P17787 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB2P17787 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB2P17787 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CHRNB2P17787 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB2P17787 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
CHRNB2P17787 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHRNB2P17787 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB2P17787 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms