Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.75■□□□□ 0.27
PCNAP12004 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCNAP12004 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCNAP12004 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.74■□□□□ 0.27
PCNAP12004 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
PCNAP12004 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.74■□□□□ 0.27
PCNAP12004 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.74■□□□□ 0.27
PCNAP12004 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.74■□□□□ 0.27
PCNAP12004 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.74■□□□□ 0.27
PCNAP12004 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.74■□□□□ 0.27
PCNAP12004 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
PCNAP12004 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.74■□□□□ 0.27
PCNAP12004 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.74■□□□□ 0.27
PCNAP12004 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.74■□□□□ 0.27
PCNAP12004 POM121L3P-201ENST00000419331 1163 ntBASIC16.74■□□□□ 0.27
PCNAP12004 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCNAP12004 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.74■□□□□ 0.27
PCNAP12004 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.74■□□□□ 0.27
PCNAP12004 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.74■□□□□ 0.27
PCNAP12004 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCNAP12004 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.74■□□□□ 0.27
PCNAP12004 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCNAP12004 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PCNAP12004 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCNAP12004 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCNAP12004 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCNAP12004 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.73■□□□□ 0.27
PCNAP12004 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.73■□□□□ 0.27
PCNAP12004 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.73■□□□□ 0.27
PCNAP12004 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 AC003669.1-201ENST00000334569 611 ntBASIC16.73■□□□□ 0.27
PCNAP12004 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.73■□□□□ 0.27
PCNAP12004 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.73■□□□□ 0.27
PCNAP12004 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.73■□□□□ 0.27
PCNAP12004 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.73■□□□□ 0.27
PCNAP12004 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.73■□□□□ 0.27
PCNAP12004 AD001527.2-201ENST00000622994 785 ntBASIC16.73■□□□□ 0.27
PCNAP12004 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 PCDH8P1-201ENST00000428983 2773 ntBASIC16.73■□□□□ 0.27
PCNAP12004 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCNAP12004 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCNAP12004 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.73■□□□□ 0.27
PCNAP12004 AC132938.5-201ENST00000624980 1813 ntBASIC16.73■□□□□ 0.27
PCNAP12004 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
PCNAP12004 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 AC009336.1-201ENST00000608941 1553 ntBASIC16.72■□□□□ 0.27
PCNAP12004 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.72■□□□□ 0.27
PCNAP12004 AC116353.5-201ENST00000638148 1699 ntBASIC16.72■□□□□ 0.27
PCNAP12004 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PCNAP12004 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCNAP12004 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCNAP12004 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.72■□□□□ 0.27
PCNAP12004 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCNAP12004 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.72■□□□□ 0.27
PCNAP12004 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.72■□□□□ 0.27
PCNAP12004 HCG4P8-203ENST00000443049 980 ntBASIC16.72■□□□□ 0.27
PCNAP12004 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCNAP12004 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.72■□□□□ 0.27
PCNAP12004 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms