Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 AL135999.2-201ENST00000622438 1686 ntBASIC18.57■□□□□ 0.56
CCDC172P0C7W6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC172P0C7W6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 AC106886.4-201ENST00000623557 2502 ntBASIC18.56■□□□□ 0.56
CCDC172P0C7W6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.56■□□□□ 0.56
CCDC172P0C7W6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 PCED1CP-201ENST00000419887 785 ntBASIC18.56■□□□□ 0.56
CCDC172P0C7W6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 AC087388.1-201ENST00000571370 1112 ntBASIC18.56■□□□□ 0.56
CCDC172P0C7W6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 AC073592.5-201ENST00000624854 528 ntBASIC18.56■□□□□ 0.56
CCDC172P0C7W6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC172P0C7W6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 FER1L4-210ENST00000615531 5998 ntBASIC18.55■□□□□ 0.56
CCDC172P0C7W6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 C8orf49-201ENST00000525043 1968 ntBASIC18.55■□□□□ 0.56
CCDC172P0C7W6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC172P0C7W6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms