Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 AC009949.1-201ENST00000623048 1830 ntBASIC19.56■□□□□ 0.72
TPM2P07951 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM2P07951 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM2P07951 TSPY15P-201ENST00000457163 923 ntBASIC19.56■□□□□ 0.72
TPM2P07951 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.56■□□□□ 0.72
TPM2P07951 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM2P07951 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.56■□□□□ 0.72
TPM2P07951 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM2P07951 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TPM2P07951 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM2P07951 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
TPM2P07951 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TPM2P07951 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.55■□□□□ 0.72
TPM2P07951 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.55■□□□□ 0.72
TPM2P07951 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.55■□□□□ 0.72
TPM2P07951 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.55■□□□□ 0.72
TPM2P07951 AC140113.3-201ENST00000605663 199 ntBASIC19.55■□□□□ 0.72
TPM2P07951 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM2P07951 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TPM2P07951 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM2P07951 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM2P07951 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM2P07951 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM2P07951 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM2P07951 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.54■□□□□ 0.72
TPM2P07951 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.54■□□□□ 0.72
TPM2P07951 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.54■□□□□ 0.72
TPM2P07951 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM2P07951 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
TPM2P07951 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.54■□□□□ 0.72
TPM2P07951 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
TPM2P07951 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TPM2P07951 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TPM2P07951 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM2P07951 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.54■□□□□ 0.72
TPM2P07951 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM2P07951 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM2P07951 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM2P07951 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM2P07951 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TPM2P07951 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM2P07951 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TPM2P07951 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM2P07951 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TPM2P07951 AC060834.1-201ENST00000443027 2032 ntBASIC19.53■□□□□ 0.72
TPM2P07951 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM2P07951 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TPM2P07951 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TPM2P07951 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM2P07951 GCSHP2-201ENST00000560971 527 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms