Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.99■□□□□ 0.47
RB1P06400 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
RB1P06400 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.99■□□□□ 0.47
RB1P06400 BCL2-203ENST00000589955 5011 ntBASIC17.98■□□□□ 0.47
RB1P06400 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RB1P06400 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RB1P06400 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RB1P06400 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.98■□□□□ 0.47
RB1P06400 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RB1P06400 TSSK5P-201ENST00000423978 907 ntBASIC17.98■□□□□ 0.47
RB1P06400 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.98■□□□□ 0.47
RB1P06400 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.98■□□□□ 0.47
RB1P06400 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RB1P06400 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.98■□□□□ 0.47
RB1P06400 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RB1P06400 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.98■□□□□ 0.47
RB1P06400 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RB1P06400 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
RB1P06400 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RB1P06400 AC138028.4-201ENST00000564984 1845 ntBASIC17.98■□□□□ 0.47
RB1P06400 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RB1P06400 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RB1P06400 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.97■□□□□ 0.47
RB1P06400 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 TOP3BP1-201ENST00000420768 1380 ntBASIC17.97■□□□□ 0.47
RB1P06400 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.97■□□□□ 0.47
RB1P06400 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 RN7SL692P-201ENST00000464677 288 ntBASIC17.97■□□□□ 0.47
RB1P06400 MEIS3P1-201ENST00000495167 958 ntBASIC17.97■□□□□ 0.47
RB1P06400 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.97■□□□□ 0.47
RB1P06400 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RB1P06400 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
RB1P06400 AC004233.3-201ENST00000607794 1269 ntBASIC17.97■□□□□ 0.47
RB1P06400 AC018529.1-201ENST00000613063 361 ntBASIC17.97■□□□□ 0.47
RB1P06400 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RB1P06400 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RB1P06400 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RB1P06400 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.96■□□□□ 0.47
RB1P06400 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RB1P06400 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RB1P06400 LYSMD4-203ENST00000378904 2122 ntBASIC17.96■□□□□ 0.47
RB1P06400 AC022144.1-201ENST00000602255 1580 ntBASIC17.96■□□□□ 0.47
RB1P06400 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RB1P06400 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RB1P06400 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RB1P06400 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RB1P06400 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RB1P06400 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RB1P06400 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.96■□□□□ 0.47
RB1P06400 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RB1P06400 COX5BP8-201ENST00000416911 349 ntBASIC17.96■□□□□ 0.47
RB1P06400 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RB1P06400 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.96■□□□□ 0.47
RB1P06400 MIR6752-201ENST00000618442 71 ntBASIC17.96■□□□□ 0.47
RB1P06400 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RB1P06400 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.96■□□□□ 0.47
RB1P06400 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RB1P06400 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RB1P06400 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RB1P06400 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RB1P06400 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.96■□□□□ 0.47
RB1P06400 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RB1P06400 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.96■□□□□ 0.46
RB1P06400 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.95■□□□□ 0.46
RB1P06400 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.95■□□□□ 0.46
RB1P06400 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms