Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC22.23■■□□□ 1.15
COL5A2P05997 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
COL5A2P05997 INE1-201ENST00000456273 945 ntBASIC22.23■■□□□ 1.15
COL5A2P05997 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL5A2P05997 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL5A2P05997 POLE2-203ENST00000553805 496 ntTSL 2 BASIC22.23■■□□□ 1.15
COL5A2P05997 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL5A2P05997 LITAF-210ENST00000571976 548 ntTSL 2 BASIC22.23■■□□□ 1.15
COL5A2P05997 LITAF-214ENST00000574703 486 ntTSL 2 BASIC22.23■■□□□ 1.15
COL5A2P05997 AL133215.2-201ENST00000609242 977 ntBASIC22.23■■□□□ 1.15
COL5A2P05997 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.23■■□□□ 1.15
COL5A2P05997 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL5A2P05997 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC22.23■■□□□ 1.15
COL5A2P05997 AC007541.1-201ENST00000570282 1469 ntBASIC22.23■■□□□ 1.15
COL5A2P05997 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.23■■□□□ 1.15
COL5A2P05997 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL5A2P05997 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.23■■□□□ 1.15
COL5A2P05997 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL5A2P05997 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL5A2P05997 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC22.23■■□□□ 1.15
COL5A2P05997 CENPM-206ENST00000407253 818 ntTSL 2 BASIC22.22■■□□□ 1.15
COL5A2P05997 MIR1909-201ENST00000411312 80 ntBASIC22.22■■□□□ 1.15
COL5A2P05997 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
COL5A2P05997 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC22.22■■□□□ 1.15
COL5A2P05997 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC22.22■■□□□ 1.15
COL5A2P05997 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC22.22■■□□□ 1.15
COL5A2P05997 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC22.22■■□□□ 1.15
COL5A2P05997 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC22.22■■□□□ 1.15
COL5A2P05997 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
COL5A2P05997 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL5A2P05997 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC22.22■■□□□ 1.15
COL5A2P05997 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.22■■□□□ 1.15
COL5A2P05997 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
COL5A2P05997 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.22■■□□□ 1.15
COL5A2P05997 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
COL5A2P05997 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.22■■□□□ 1.15
COL5A2P05997 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.22■■□□□ 1.15
COL5A2P05997 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC22.22■■□□□ 1.15
COL5A2P05997 AC098614.1-201ENST00000368528 745 ntBASIC22.22■■□□□ 1.15
COL5A2P05997 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
COL5A2P05997 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL5A2P05997 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL5A2P05997 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL5A2P05997 DGCR5-201ENST00000399539 862 ntBASIC22.22■■□□□ 1.15
COL5A2P05997 AL353779.1-201ENST00000434793 351 ntBASIC22.22■■□□□ 1.15
COL5A2P05997 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL5A2P05997 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL5A2P05997 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC22.22■■□□□ 1.15
COL5A2P05997 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC22.22■■□□□ 1.15
COL5A2P05997 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC22.22■■□□□ 1.15
COL5A2P05997 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC22.22■■□□□ 1.15
COL5A2P05997 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL5A2P05997 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.21■■□□□ 1.15
COL5A2P05997 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL5A2P05997 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL5A2P05997 KRT8P49-201ENST00000604166 1432 ntBASIC22.21■■□□□ 1.15
COL5A2P05997 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC22.21■■□□□ 1.15
COL5A2P05997 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL5A2P05997 AC009113.1-201ENST00000570267 2443 ntBASIC22.21■■□□□ 1.15
COL5A2P05997 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
COL5A2P05997 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL5A2P05997 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC22.21■■□□□ 1.15
COL5A2P05997 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC22.21■■□□□ 1.15
COL5A2P05997 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL5A2P05997 ACA64.2-201ENST00000459014 129 ntBASIC22.21■■□□□ 1.15
COL5A2P05997 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL5A2P05997 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC22.21■■□□□ 1.15
COL5A2P05997 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC22.21■■□□□ 1.15
COL5A2P05997 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL5A2P05997 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
COL5A2P05997 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC22.2■■□□□ 1.15
COL5A2P05997 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.2■■□□□ 1.14
COL5A2P05997 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL5A2P05997 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
COL5A2P05997 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC22.2■■□□□ 1.14
COL5A2P05997 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.2■■□□□ 1.14
COL5A2P05997 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL5A2P05997 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC22.2■■□□□ 1.14
COL5A2P05997 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL5A2P05997 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL5A2P05997 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
COL5A2P05997 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL5A2P05997 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL5A2P05997 AC098818.2-201ENST00000564925 2320 ntBASIC22.2■■□□□ 1.14
COL5A2P05997 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL5A2P05997 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL5A2P05997 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL5A2P05997 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
COL5A2P05997 DFFBP1-201ENST00000433250 979 ntBASIC22.2■■□□□ 1.14
COL5A2P05997 MTND6P24-201ENST00000440466 518 ntBASIC22.2■■□□□ 1.14
COL5A2P05997 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
COL5A2P05997 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC22.2■■□□□ 1.14
COL5A2P05997 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
COL5A2P05997 RN7SL828P-201ENST00000607615 303 ntBASIC22.2■■□□□ 1.14
COL5A2P05997 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC22.2■■□□□ 1.14
COL5A2P05997 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC22.2■■□□□ 1.14
COL5A2P05997 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
COL5A2P05997 AC012317.2-201ENST00000623305 2251 ntBASIC22.2■■□□□ 1.14
COL5A2P05997 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL5A2P05997 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms