Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP1A1P05023 AC097374.2-201ENST00000618617 1306 ntBASIC18.28■□□□□ 0.52
ATP1A1P05023 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP1A1P05023 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
ATP1A1P05023 MYCLP1-201ENST00000372451 1075 ntBASIC18.28■□□□□ 0.52
ATP1A1P05023 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP1A1P05023 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP1A1P05023 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP1A1P05023 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP1A1P05023 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP1A1P05023 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATP1A1P05023 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 OR6D1P-203ENST00000641209 4860 ntBASIC18.28■□□□□ 0.52
ATP1A1P05023 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP1A1P05023 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP1A1P05023 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ATP1A1P05023 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ATP1A1P05023 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
ATP1A1P05023 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ATP1A1P05023 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ATP1A1P05023 HBZP1-201ENST00000354915 429 ntBASIC18.27■□□□□ 0.52
ATP1A1P05023 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP1A1P05023 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP1A1P05023 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ATP1A1P05023 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP1A1P05023 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP1A1P05023 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP1A1P05023 AL358472.4-201ENST00000633140 710 ntBASIC18.27■□□□□ 0.52
ATP1A1P05023 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.27■□□□□ 0.52
ATP1A1P05023 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP1A1P05023 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP1A1P05023 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
ATP1A1P05023 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP1A1P05023 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ATP1A1P05023 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP1A1P05023 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.27■□□□□ 0.51
ATP1A1P05023 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
ATP1A1P05023 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP1A1P05023 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP1A1P05023 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.27■□□□□ 0.51
ATP1A1P05023 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP1A1P05023 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ATP1A1P05023 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 HYMAI-201ENST00000635591 3347 ntBASIC18.26■□□□□ 0.51
ATP1A1P05023 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP1A1P05023 IGHV3-52-201ENST00000519770 353 ntBASIC18.26■□□□□ 0.51
ATP1A1P05023 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP1A1P05023 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP1A1P05023 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP1A1P05023 ZNF444P1-201ENST00000559497 298 ntBASIC18.26■□□□□ 0.51
ATP1A1P05023 FRMD8P1-201ENST00000440433 1524 ntBASIC18.26■□□□□ 0.51
ATP1A1P05023 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP1A1P05023 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
ATP1A1P05023 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP1A1P05023 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP1A1P05023 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP1A1P05023 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP1A1P05023 ALOX12P2-203ENST00000570921 1945 ntBASIC18.25■□□□□ 0.51
ATP1A1P05023 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP1A1P05023 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP1A1P05023 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP1A1P05023 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP1A1P05023 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms