Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOC3P02656 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC3P02656 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC3P02656 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.77□□□□□ -0.21
APOC3P02656 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC3P02656 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC3P02656 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 AL603832.2-201ENST00000566195 2125 ntBASIC13.77□□□□□ -0.21
APOC3P02656 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC3P02656 LINC00528-201ENST00000600723 2160 ntBASIC13.77□□□□□ -0.21
APOC3P02656 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOC3P02656 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
APOC3P02656 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOC3P02656 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 AC138969.2-201ENST00000532739 9932 ntBASIC13.77□□□□□ -0.21
APOC3P02656 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOC3P02656 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
APOC3P02656 CICP20-201ENST00000443330 2801 ntBASIC13.77□□□□□ -0.21
APOC3P02656 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
APOC3P02656 AC005252.3-201ENST00000623855 2258 ntBASIC13.76□□□□□ -0.21
APOC3P02656 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
APOC3P02656 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
APOC3P02656 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
APOC3P02656 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 DUTP2-201ENST00000519164 463 ntBASIC13.76□□□□□ -0.21
APOC3P02656 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC3P02656 AL162412.1-201ENST00000567129 965 ntBASIC13.76□□□□□ -0.21
APOC3P02656 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC3P02656 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC3P02656 HLA-A-202ENST00000376806 1854 ntBASIC13.76□□□□□ -0.21
APOC3P02656 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
APOC3P02656 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APOC3P02656 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC3P02656 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC3P02656 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC3P02656 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 PRAL-201ENST00000624952 3286 ntBASIC13.75□□□□□ -0.21
APOC3P02656 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
APOC3P02656 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
APOC3P02656 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.75□□□□□ -0.21
APOC3P02656 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.75□□□□□ -0.21
APOC3P02656 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
APOC3P02656 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms