Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A1P02462 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.72■□□□□ 0.91
COL4A1P02462 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A1P02462 BANF1P1-201ENST00000553684 263 ntBASIC20.72■□□□□ 0.91
COL4A1P02462 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.72■□□□□ 0.91
COL4A1P02462 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.72■□□□□ 0.91
COL4A1P02462 AL158211.3-201ENST00000607385 239 ntBASIC20.72■□□□□ 0.91
COL4A1P02462 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A1P02462 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A1P02462 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.72■□□□□ 0.91
COL4A1P02462 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.72■□□□□ 0.91
COL4A1P02462 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL4A1P02462 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.72■□□□□ 0.91
COL4A1P02462 AC068880.1-201ENST00000507289 2297 ntBASIC20.72■□□□□ 0.91
COL4A1P02462 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A1P02462 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A1P02462 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.71■□□□□ 0.91
COL4A1P02462 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A1P02462 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A1P02462 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.71■□□□□ 0.91
COL4A1P02462 AC097493.3-201ENST00000509725 367 ntBASIC20.71■□□□□ 0.91
COL4A1P02462 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.71■□□□□ 0.91
COL4A1P02462 KRT8P23-201ENST00000560090 1207 ntBASIC20.71■□□□□ 0.91
COL4A1P02462 SPDYE12P-201ENST00000618416 771 ntBASIC20.71■□□□□ 0.91
COL4A1P02462 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COL4A1P02462 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.71■□□□□ 0.91
COL4A1P02462 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A1P02462 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A1P02462 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A1P02462 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COL4A1P02462 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.71■□□□□ 0.91
COL4A1P02462 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL4A1P02462 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.71■□□□□ 0.91
COL4A1P02462 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
COL4A1P02462 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.7■□□□□ 0.91
COL4A1P02462 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.7■□□□□ 0.91
COL4A1P02462 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
COL4A1P02462 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
COL4A1P02462 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.7■□□□□ 0.91
COL4A1P02462 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.7■□□□□ 0.91
COL4A1P02462 KRT8P49-201ENST00000604166 1432 ntBASIC20.7■□□□□ 0.91
COL4A1P02462 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
COL4A1P02462 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COL4A1P02462 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A1P02462 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.7■□□□□ 0.9
COL4A1P02462 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A1P02462 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL4A1P02462 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.7■□□□□ 0.9
COL4A1P02462 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.7■□□□□ 0.9
COL4A1P02462 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A1P02462 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A1P02462 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A1P02462 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.7■□□□□ 0.9
COL4A1P02462 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A1P02462 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A1P02462 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A1P02462 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
COL4A1P02462 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
COL4A1P02462 AC004890.2-204ENST00000481968 304 ntBASIC20.7■□□□□ 0.9
COL4A1P02462 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.7■□□□□ 0.9
COL4A1P02462 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.7■□□□□ 0.9
COL4A1P02462 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A1P02462 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.7■□□□□ 0.9
COL4A1P02462 MPDU1-223ENST00000582151 728 ntBASIC20.7■□□□□ 0.9
COL4A1P02462 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.7■□□□□ 0.9
COL4A1P02462 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.7■□□□□ 0.9
COL4A1P02462 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.7■□□□□ 0.9
COL4A1P02462 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.7■□□□□ 0.9
COL4A1P02462 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A1P02462 AC108860.2-201ENST00000562760 2183 ntBASIC20.7■□□□□ 0.9
COL4A1P02462 SNX33P1-201ENST00000592116 1762 ntBASIC20.7■□□□□ 0.9
COL4A1P02462 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL4A1P02462 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL4A1P02462 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COL4A1P02462 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.69■□□□□ 0.9
COL4A1P02462 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COL4A1P02462 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL4A1P02462 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL4A1P02462 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL4A1P02462 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.69■□□□□ 0.9
COL4A1P02462 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL4A1P02462 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL4A1P02462 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.69■□□□□ 0.9
COL4A1P02462 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL4A1P02462 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COL4A1P02462 MIR4453-201ENST00000584019 89 ntBASIC20.69■□□□□ 0.9
COL4A1P02462 AC004790.1-201ENST00000612686 536 ntBASIC20.69■□□□□ 0.9
COL4A1P02462 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COL4A1P02462 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COL4A1P02462 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.69■□□□□ 0.9
COL4A1P02462 AL671710.1-201ENST00000610245 2349 ntBASIC20.69■□□□□ 0.9
COL4A1P02462 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL4A1P02462 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL4A1P02462 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.69■□□□□ 0.9
COL4A1P02462 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL4A1P02462 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.68■□□□□ 0.9
COL4A1P02462 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL4A1P02462 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.68■□□□□ 0.9
COL4A1P02462 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL4A1P02462 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms