Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 AC009533.2-201ENST00000543664 586 ntBASIC15.43■□□□□ 0.06
HLA-DQA2P01906 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 AL121956.5-201ENST00000625261 221 ntBASIC15.43■□□□□ 0.06
HLA-DQA2P01906 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA2P01906 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 NORAD-201ENST00000565493 5339 ntBASIC15.42■□□□□ 0.06
HLA-DQA2P01906 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 CHCHD2P8-201ENST00000429873 447 ntBASIC15.42■□□□□ 0.06
HLA-DQA2P01906 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 NTF6B-201ENST00000591913 560 ntBASIC15.42■□□□□ 0.06
HLA-DQA2P01906 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 AC005915.1-201ENST00000624912 2018 ntBASIC15.42■□□□□ 0.06
HLA-DQA2P01906 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 AC124067.4-201ENST00000519691 2379 ntBASIC15.42■□□□□ 0.06
HLA-DQA2P01906 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 KRT8P10-201ENST00000450021 1447 ntBASIC15.42■□□□□ 0.06
HLA-DQA2P01906 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQA2P01906 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DQA2P01906 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQA2P01906 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DQA2P01906 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQA2P01906 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQA2P01906 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQA2P01906 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQA2P01906 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQA2P01906 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DQA2P01906 AL049757.1-201ENST00000616842 1596 ntBASIC15.41■□□□□ 0.06
HLA-DQA2P01906 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms