Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TNFP01375 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TNFP01375 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
TNFP01375 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFP01375 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFP01375 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.68■□□□□ 0.26
TNFP01375 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.68■□□□□ 0.26
TNFP01375 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFP01375 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
TNFP01375 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.68■□□□□ 0.26
TNFP01375 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFP01375 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.68■□□□□ 0.26
TNFP01375 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFP01375 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFP01375 AC092902.6-201ENST00000641783 218 ntBASIC16.68■□□□□ 0.26
TNFP01375 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TNFP01375 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFP01375 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.68■□□□□ 0.26
TNFP01375 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFP01375 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TNFP01375 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFP01375 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFP01375 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFP01375 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFP01375 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.67■□□□□ 0.26
TNFP01375 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFP01375 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TNFP01375 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFP01375 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFP01375 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFP01375 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFP01375 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFP01375 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFP01375 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFP01375 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFP01375 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TNFP01375 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFP01375 KRT18P28-201ENST00000453838 1332 ntBASIC16.67■□□□□ 0.26
TNFP01375 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFP01375 AC092919.2-201ENST00000623631 1645 ntBASIC16.67■□□□□ 0.26
TNFP01375 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFP01375 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TNFP01375 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TNFP01375 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFP01375 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFP01375 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFP01375 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFP01375 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFP01375 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TNFP01375 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFP01375 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFP01375 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFP01375 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFP01375 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFP01375 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TNFP01375 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TNFP01375 AP000344.2-201ENST00000512987 629 ntBASIC16.66■□□□□ 0.26
TNFP01375 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFP01375 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.66■□□□□ 0.26
TNFP01375 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFP01375 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFP01375 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFP01375 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFP01375 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFP01375 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFP01375 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TNFP01375 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFP01375 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFP01375 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFP01375 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFP01375 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFP01375 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFP01375 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFP01375 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
TNFP01375 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFP01375 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TNFP01375 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFP01375 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFP01375 AC140658.5-201ENST00000438532 169 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms