Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT3O75175 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT3O75175 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
CNOT3O75175 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT3O75175 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT3O75175 AC100803.2-201ENST00000562459 1963 ntBASIC16.69■□□□□ 0.26
CNOT3O75175 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.69■□□□□ 0.26
CNOT3O75175 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CNOT3O75175 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.69■□□□□ 0.26
CNOT3O75175 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.69■□□□□ 0.26
CNOT3O75175 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT3O75175 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.69■□□□□ 0.26
CNOT3O75175 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.69■□□□□ 0.26
CNOT3O75175 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CNOT3O75175 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT3O75175 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT3O75175 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CNOT3O75175 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CNOT3O75175 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CNOT3O75175 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT3O75175 PCDH8P1-201ENST00000428983 2773 ntBASIC16.69■□□□□ 0.26
CNOT3O75175 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CNOT3O75175 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT3O75175 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CNOT3O75175 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT3O75175 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT3O75175 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CNOT3O75175 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 FLJ38576-201ENST00000623820 2459 ntBASIC16.68■□□□□ 0.26
CNOT3O75175 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.68■□□□□ 0.26
CNOT3O75175 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 SCARNA2-201ENST00000458748 420 ntBASIC16.68■□□□□ 0.26
CNOT3O75175 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.68■□□□□ 0.26
CNOT3O75175 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.68■□□□□ 0.26
CNOT3O75175 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 AC073648.2-201ENST00000510116 352 ntBASIC16.68■□□□□ 0.26
CNOT3O75175 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.68■□□□□ 0.26
CNOT3O75175 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.68■□□□□ 0.26
CNOT3O75175 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CNOT3O75175 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.68■□□□□ 0.26
CNOT3O75175 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.68■□□□□ 0.26
CNOT3O75175 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CNOT3O75175 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT3O75175 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CNOT3O75175 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT3O75175 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.67■□□□□ 0.26
CNOT3O75175 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT3O75175 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms