Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TSPAN3O60637 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 YBX2P1-201ENST00000394192 760 ntBASIC17.65■□□□□ 0.42
TSPAN3O60637 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TSPAN3O60637 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TSPAN3O60637 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.65■□□□□ 0.42
TSPAN3O60637 PAWRP1-201ENST00000451083 565 ntBASIC17.65■□□□□ 0.42
TSPAN3O60637 SLC25A6P2-201ENST00000497974 877 ntBASIC17.65■□□□□ 0.42
TSPAN3O60637 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.65■□□□□ 0.42
TSPAN3O60637 AC010507.1-201ENST00000633895 436 ntBASIC17.65■□□□□ 0.42
TSPAN3O60637 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.65■□□□□ 0.42
TSPAN3O60637 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TSPAN3O60637 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TSPAN3O60637 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.65■□□□□ 0.42
TSPAN3O60637 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TSPAN3O60637 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TSPAN3O60637 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.64■□□□□ 0.42
TSPAN3O60637 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TSPAN3O60637 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
TSPAN3O60637 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TSPAN3O60637 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TSPAN3O60637 AC093525.9-201ENST00000624961 1746 ntBASIC17.64■□□□□ 0.41
TSPAN3O60637 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.64■□□□□ 0.41
TSPAN3O60637 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TSPAN3O60637 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TSPAN3O60637 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.64■□□□□ 0.41
TSPAN3O60637 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TSPAN3O60637 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TSPAN3O60637 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.64■□□□□ 0.41
TSPAN3O60637 AC087163.2-201ENST00000457299 853 ntBASIC17.64■□□□□ 0.41
TSPAN3O60637 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.64■□□□□ 0.41
TSPAN3O60637 AC002347.1-201ENST00000569543 541 ntBASIC17.64■□□□□ 0.41
TSPAN3O60637 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.64■□□□□ 0.41
TSPAN3O60637 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TSPAN3O60637 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TSPAN3O60637 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TSPAN3O60637 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TSPAN3O60637 PP12613-201ENST00000424958 2230 ntBASIC17.64■□□□□ 0.41
TSPAN3O60637 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TSPAN3O60637 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.64■□□□□ 0.41
TSPAN3O60637 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TSPAN3O60637 AC016396.2-201ENST00000562575 1417 ntBASIC17.64■□□□□ 0.41
TSPAN3O60637 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.63■□□□□ 0.41
TSPAN3O60637 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.63■□□□□ 0.41
TSPAN3O60637 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
TSPAN3O60637 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.63■□□□□ 0.41
TSPAN3O60637 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.63■□□□□ 0.41
TSPAN3O60637 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.63■□□□□ 0.41
TSPAN3O60637 AC004877.2-201ENST00000623941 599 ntBASIC17.63■□□□□ 0.41
TSPAN3O60637 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 BCAR1-209ENST00000546196 1340 ntBASIC17.63■□□□□ 0.41
TSPAN3O60637 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.63■□□□□ 0.41
TSPAN3O60637 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TSPAN3O60637 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.63■□□□□ 0.41
TSPAN3O60637 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN3O60637 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.63■□□□□ 0.41
TSPAN3O60637 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.62■□□□□ 0.41
TSPAN3O60637 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TSPAN3O60637 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.62■□□□□ 0.41
TSPAN3O60637 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TSPAN3O60637 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TSPAN3O60637 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TSPAN3O60637 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TSPAN3O60637 SLC25A1P3-201ENST00000395415 828 ntBASIC17.62■□□□□ 0.41
TSPAN3O60637 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TSPAN3O60637 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.62■□□□□ 0.41
TSPAN3O60637 AC112482.1-201ENST00000492080 688 ntBASIC17.62■□□□□ 0.41
TSPAN3O60637 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.62■□□□□ 0.41
TSPAN3O60637 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms