Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.46■□□□□ 0.23
GFRA3O60609 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GFRA3O60609 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
GFRA3O60609 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
GFRA3O60609 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GFRA3O60609 HINT2P1-201ENST00000419438 481 ntBASIC16.46■□□□□ 0.23
GFRA3O60609 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 ZNF767P-206ENST00000513792 565 ntBASIC16.46■□□□□ 0.23
GFRA3O60609 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.46■□□□□ 0.23
GFRA3O60609 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.46■□□□□ 0.23
GFRA3O60609 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 MIR4722-201ENST00000578292 60 ntBASIC16.46■□□□□ 0.23
GFRA3O60609 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.46■□□□□ 0.23
GFRA3O60609 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.46■□□□□ 0.23
GFRA3O60609 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.46■□□□□ 0.23
GFRA3O60609 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.46■□□□□ 0.23
GFRA3O60609 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GFRA3O60609 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.46■□□□□ 0.23
GFRA3O60609 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.46■□□□□ 0.22
GFRA3O60609 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GFRA3O60609 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.45■□□□□ 0.22
GFRA3O60609 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.45■□□□□ 0.22
GFRA3O60609 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.45■□□□□ 0.22
GFRA3O60609 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GFRA3O60609 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GFRA3O60609 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GFRA3O60609 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GFRA3O60609 RNU1-129P-201ENST00000384064 167 ntBASIC16.45■□□□□ 0.22
GFRA3O60609 FO681548.1-201ENST00000455617 1132 ntBASIC16.45■□□□□ 0.22
GFRA3O60609 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.45■□□□□ 0.22
GFRA3O60609 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.45■□□□□ 0.22
GFRA3O60609 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.45■□□□□ 0.22
GFRA3O60609 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.45■□□□□ 0.22
GFRA3O60609 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.45■□□□□ 0.22
GFRA3O60609 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.45■□□□□ 0.22
GFRA3O60609 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 AC044860.1-202ENST00000559481 777 ntBASIC16.45■□□□□ 0.22
GFRA3O60609 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.45■□□□□ 0.22
GFRA3O60609 U1.21-201ENST00000580816 167 ntBASIC16.45■□□□□ 0.22
GFRA3O60609 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.45■□□□□ 0.22
GFRA3O60609 AC010319.3-201ENST00000597028 470 ntBASIC16.45■□□□□ 0.22
GFRA3O60609 AC233724.13-201ENST00000598383 410 ntBASIC16.45■□□□□ 0.22
GFRA3O60609 AC026740.1-201ENST00000607068 791 ntBASIC16.45■□□□□ 0.22
GFRA3O60609 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.45■□□□□ 0.22
GFRA3O60609 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.45■□□□□ 0.22
GFRA3O60609 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.45■□□□□ 0.22
GFRA3O60609 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
GFRA3O60609 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GFRA3O60609 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.45■□□□□ 0.22
GFRA3O60609 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
GFRA3O60609 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.45■□□□□ 0.22
GFRA3O60609 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GFRA3O60609 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.45■□□□□ 0.22
GFRA3O60609 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GFRA3O60609 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.44■□□□□ 0.22
GFRA3O60609 AL135999.2-201ENST00000622438 1686 ntBASIC16.44■□□□□ 0.22
GFRA3O60609 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
GFRA3O60609 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.44■□□□□ 0.22
GFRA3O60609 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
GFRA3O60609 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.44■□□□□ 0.22
GFRA3O60609 AL080243.2-201ENST00000418783 582 ntBASIC16.44■□□□□ 0.22
GFRA3O60609 AC098850.1-201ENST00000419919 790 ntBASIC16.44■□□□□ 0.22
GFRA3O60609 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.44■□□□□ 0.22
GFRA3O60609 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.44■□□□□ 0.22
GFRA3O60609 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.44■□□□□ 0.22
GFRA3O60609 AL079307.3-201ENST00000556114 283 ntBASIC16.44■□□□□ 0.22
GFRA3O60609 C2orf69P2-201ENST00000562032 1123 ntBASIC16.44■□□□□ 0.22
GFRA3O60609 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.44■□□□□ 0.22
GFRA3O60609 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms