Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.14■□□□□ 0.97
SMARCA5O60264 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.14■□□□□ 0.97
SMARCA5O60264 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCA5O60264 AC073648.2-201ENST00000510116 352 ntBASIC21.14■□□□□ 0.97
SMARCA5O60264 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.14■□□□□ 0.97
SMARCA5O60264 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
SMARCA5O60264 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.14■□□□□ 0.97
SMARCA5O60264 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.14■□□□□ 0.97
SMARCA5O60264 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCA5O60264 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SMARCA5O60264 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SMARCA5O60264 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCA5O60264 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.14■□□□□ 0.97
SMARCA5O60264 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.14■□□□□ 0.97
SMARCA5O60264 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCA5O60264 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.97
SMARCA5O60264 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SMARCA5O60264 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCA5O60264 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SMARCA5O60264 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCA5O60264 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SMARCA5O60264 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCA5O60264 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCA5O60264 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCA5O60264 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SMARCA5O60264 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SMARCA5O60264 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.13■□□□□ 0.97
SMARCA5O60264 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.13■□□□□ 0.97
SMARCA5O60264 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.13■□□□□ 0.97
SMARCA5O60264 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.13■□□□□ 0.97
SMARCA5O60264 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.13■□□□□ 0.97
SMARCA5O60264 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.13■□□□□ 0.97
SMARCA5O60264 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.13■□□□□ 0.97
SMARCA5O60264 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.13■□□□□ 0.97
SMARCA5O60264 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.13■□□□□ 0.97
SMARCA5O60264 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.13■□□□□ 0.97
SMARCA5O60264 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.13■□□□□ 0.97
SMARCA5O60264 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.13■□□□□ 0.97
SMARCA5O60264 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SMARCA5O60264 AC124947.2-201ENST00000547118 1133 ntBASIC21.13■□□□□ 0.97
SMARCA5O60264 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.13■□□□□ 0.97
SMARCA5O60264 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 AC084018.2-201ENST00000613093 2607 ntBASIC21.13■□□□□ 0.97
SMARCA5O60264 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMARCA5O60264 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMARCA5O60264 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMARCA5O60264 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCA5O60264 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCA5O60264 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
SMARCA5O60264 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.12■□□□□ 0.97
SMARCA5O60264 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCA5O60264 AC092171.3-201ENST00000610122 2651 ntBASIC21.12■□□□□ 0.97
SMARCA5O60264 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.12■□□□□ 0.97
SMARCA5O60264 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCA5O60264 AC073621.1-201ENST00000392730 636 ntBASIC21.12■□□□□ 0.97
SMARCA5O60264 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCA5O60264 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCA5O60264 KRT18P67-201ENST00000432816 1264 ntBASIC21.12■□□□□ 0.97
SMARCA5O60264 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.12■□□□□ 0.97
SMARCA5O60264 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.12■□□□□ 0.97
SMARCA5O60264 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.12■□□□□ 0.97
SMARCA5O60264 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SMARCA5O60264 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.12■□□□□ 0.97
SMARCA5O60264 AL160237.2-201ENST00000556165 472 ntBASIC21.12■□□□□ 0.97
SMARCA5O60264 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.12■□□□□ 0.97
SMARCA5O60264 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMARCA5O60264 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCA5O60264 AC078925.2-201ENST00000624013 1973 ntBASIC21.12■□□□□ 0.97
SMARCA5O60264 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.12■□□□□ 0.97
SMARCA5O60264 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCA5O60264 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCA5O60264 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCA5O60264 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCA5O60264 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCA5O60264 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCA5O60264 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.11■□□□□ 0.97
SMARCA5O60264 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCA5O60264 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.11■□□□□ 0.97
SMARCA5O60264 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SMARCA5O60264 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCA5O60264 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCA5O60264 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.11■□□□□ 0.97
SMARCA5O60264 AP002414.1-201ENST00000391405 1147 ntBASIC21.11■□□□□ 0.97
SMARCA5O60264 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms