Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC28A2O43868 AC080080.1-201ENST00000625121 2420 ntBASIC16.55■□□□□ 0.24
SLC28A2O43868 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SLC28A2O43868 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 AC254562.1-201ENST00000417586 456 ntBASIC16.55■□□□□ 0.24
SLC28A2O43868 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 AC112698.1-201ENST00000510299 916 ntBASIC16.55■□□□□ 0.24
SLC28A2O43868 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC28A2O43868 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC28A2O43868 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC28A2O43868 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
SLC28A2O43868 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.55■□□□□ 0.24
SLC28A2O43868 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC28A2O43868 AC008735.5-201ENST00000623544 497 ntBASIC16.55■□□□□ 0.24
SLC28A2O43868 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC28A2O43868 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SLC28A2O43868 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC28A2O43868 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SLC28A2O43868 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SLC28A2O43868 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SLC28A2O43868 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SLC28A2O43868 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC28A2O43868 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SLC28A2O43868 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC28A2O43868 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC28A2O43868 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.54■□□□□ 0.24
SLC28A2O43868 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC28A2O43868 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.54■□□□□ 0.24
SLC28A2O43868 SPCS2P1-201ENST00000561636 679 ntBASIC16.54■□□□□ 0.24
SLC28A2O43868 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC28A2O43868 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SLC28A2O43868 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC28A2O43868 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC28A2O43868 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
SLC28A2O43868 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SLC28A2O43868 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SLC28A2O43868 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SLC28A2O43868 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SLC28A2O43868 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SLC28A2O43868 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC28A2O43868 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SLC28A2O43868 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC28A2O43868 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SLC28A2O43868 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC28A2O43868 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SLC28A2O43868 CNN2P11-201ENST00000429351 262 ntBASIC16.53■□□□□ 0.24
SLC28A2O43868 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC28A2O43868 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC28A2O43868 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC28A2O43868 AC105339.3-201ENST00000560043 636 ntBASIC16.53■□□□□ 0.24
SLC28A2O43868 MIR4469-201ENST00000583919 79 ntBASIC16.53■□□□□ 0.24
SLC28A2O43868 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms