Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.33■□□□□ 0.36
KDELR3O43731 MIR940-201ENST00000401276 94 ntBASIC17.33■□□□□ 0.36
KDELR3O43731 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.33■□□□□ 0.36
KDELR3O43731 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.33■□□□□ 0.36
KDELR3O43731 FAM185BP-201ENST00000443595 716 ntBASIC17.33■□□□□ 0.36
KDELR3O43731 CXCL1P1-201ENST00000502804 216 ntBASIC17.33■□□□□ 0.36
KDELR3O43731 AC107918.2-201ENST00000530817 355 ntBASIC17.33■□□□□ 0.36
KDELR3O43731 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.33■□□□□ 0.36
KDELR3O43731 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.33■□□□□ 0.36
KDELR3O43731 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.33■□□□□ 0.36
KDELR3O43731 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
KDELR3O43731 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.33■□□□□ 0.36
KDELR3O43731 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.33■□□□□ 0.36
KDELR3O43731 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.33■□□□□ 0.36
KDELR3O43731 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.33■□□□□ 0.36
KDELR3O43731 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.32■□□□□ 0.36
KDELR3O43731 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.32■□□□□ 0.36
KDELR3O43731 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
KDELR3O43731 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 TOP3BP1-201ENST00000420768 1380 ntBASIC17.32■□□□□ 0.36
KDELR3O43731 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
KDELR3O43731 AC092068.3-201ENST00000587894 2016 ntBASIC17.32■□□□□ 0.36
KDELR3O43731 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KDELR3O43731 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KDELR3O43731 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.32■□□□□ 0.36
KDELR3O43731 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.32■□□□□ 0.36
KDELR3O43731 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.32■□□□□ 0.36
KDELR3O43731 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.32■□□□□ 0.36
KDELR3O43731 RNA5SP416-201ENST00000516838 111 ntBASIC17.32■□□□□ 0.36
KDELR3O43731 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
KDELR3O43731 AC096734.2-201ENST00000562054 433 ntBASIC17.32■□□□□ 0.36
KDELR3O43731 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.32■□□□□ 0.36
KDELR3O43731 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.32■□□□□ 0.36
KDELR3O43731 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
KDELR3O43731 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
KDELR3O43731 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.32■□□□□ 0.36
KDELR3O43731 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDELR3O43731 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.32■□□□□ 0.36
KDELR3O43731 AC060834.1-201ENST00000443027 2032 ntBASIC17.31■□□□□ 0.36
KDELR3O43731 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
KDELR3O43731 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.31■□□□□ 0.36
KDELR3O43731 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.31■□□□□ 0.36
KDELR3O43731 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.31■□□□□ 0.36
KDELR3O43731 KRT8P49-201ENST00000604166 1432 ntBASIC17.31■□□□□ 0.36
KDELR3O43731 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.31■□□□□ 0.36
KDELR3O43731 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.31■□□□□ 0.36
KDELR3O43731 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.31■□□□□ 0.36
KDELR3O43731 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
KDELR3O43731 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
KDELR3O43731 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.31■□□□□ 0.36
KDELR3O43731 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.31■□□□□ 0.36
KDELR3O43731 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
KDELR3O43731 POLD2P1-201ENST00000511220 997 ntBASIC17.31■□□□□ 0.36
KDELR3O43731 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.31■□□□□ 0.36
KDELR3O43731 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.31■□□□□ 0.36
KDELR3O43731 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.31■□□□□ 0.36
KDELR3O43731 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.31■□□□□ 0.36
KDELR3O43731 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms