Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.27■□□□□ 0.68
CHMP2AO43633 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.27■□□□□ 0.68
CHMP2AO43633 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2AO43633 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.27■□□□□ 0.68
CHMP2AO43633 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP2AO43633 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP2AO43633 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CHMP2AO43633 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP2AO43633 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHMP2AO43633 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP2AO43633 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP2AO43633 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CHMP2AO43633 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CHMP2AO43633 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP2AO43633 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP2AO43633 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.26■□□□□ 0.67
CHMP2AO43633 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP2AO43633 GGTLC5P-201ENST00000617623 998 ntBASIC19.26■□□□□ 0.67
CHMP2AO43633 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHMP2AO43633 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP2AO43633 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CHMP2AO43633 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CHMP2AO43633 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2AO43633 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 AL023806.1-201ENST00000603994 1649 ntBASIC19.25■□□□□ 0.67
CHMP2AO43633 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP2AO43633 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CHMP2AO43633 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CHMP2AO43633 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP2AO43633 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP2AO43633 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CHMP2AO43633 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP2AO43633 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.25■□□□□ 0.67
CHMP2AO43633 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP2AO43633 VN2R19P-201ENST00000442399 1052 ntBASIC19.25■□□□□ 0.67
CHMP2AO43633 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP2AO43633 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP2AO43633 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.25■□□□□ 0.67
CHMP2AO43633 OR7E47P-204ENST00000575924 449 ntBASIC19.25■□□□□ 0.67
CHMP2AO43633 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.25■□□□□ 0.67
CHMP2AO43633 FAM197Y3-203ENST00000618346 717 ntBASIC19.25■□□□□ 0.67
CHMP2AO43633 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP2AO43633 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2AO43633 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2AO43633 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2AO43633 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHMP2AO43633 AC012313.1-201ENST00000593393 3059 ntBASIC19.24■□□□□ 0.67
CHMP2AO43633 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHMP2AO43633 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHMP2AO43633 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP2AO43633 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2AO43633 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.24■□□□□ 0.67
CHMP2AO43633 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP2AO43633 AL591424.1-201ENST00000442569 1213 ntBASIC19.24■□□□□ 0.67
CHMP2AO43633 KRT18P2-201ENST00000447938 1258 ntBASIC19.24■□□□□ 0.67
CHMP2AO43633 PAWRP1-201ENST00000451083 565 ntBASIC19.24■□□□□ 0.67
CHMP2AO43633 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.24■□□□□ 0.67
CHMP2AO43633 AC087163.2-201ENST00000457299 853 ntBASIC19.24■□□□□ 0.67
CHMP2AO43633 RNA5SP416-201ENST00000516838 111 ntBASIC19.24■□□□□ 0.67
CHMP2AO43633 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.24■□□□□ 0.67
CHMP2AO43633 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP2AO43633 AC018845.2-201ENST00000568326 409 ntBASIC19.24■□□□□ 0.67
CHMP2AO43633 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CHMP2AO43633 AC010654.1-201ENST00000615722 808 ntBASIC19.24■□□□□ 0.67
CHMP2AO43633 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP2AO43633 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CHMP2AO43633 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2AO43633 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2AO43633 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHMP2AO43633 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2AO43633 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP2AO43633 PMS2P7-201ENST00000506558 1336 ntBASIC19.24■□□□□ 0.67
CHMP2AO43633 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms