Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFA1O15239 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFA1O15239 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFA1O15239 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFA1O15239 KRT89P-201ENST00000620027 1478 ntBASIC11.77□□□□□ -0.52
NDUFA1O15239 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFA1O15239 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFA1O15239 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.77□□□□□ -0.52
NDUFA1O15239 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.77□□□□□ -0.52
NDUFA1O15239 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFA1O15239 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFA1O15239 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.77□□□□□ -0.53
NDUFA1O15239 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.77□□□□□ -0.53
NDUFA1O15239 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 LIN28AP1-201ENST00000429574 405 ntBASIC11.77□□□□□ -0.53
NDUFA1O15239 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC11.77□□□□□ -0.53
NDUFA1O15239 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.77□□□□□ -0.53
NDUFA1O15239 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC11.77□□□□□ -0.53
NDUFA1O15239 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.77□□□□□ -0.53
NDUFA1O15239 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.77□□□□□ -0.53
NDUFA1O15239 AC140113.3-201ENST00000605663 199 ntBASIC11.77□□□□□ -0.53
NDUFA1O15239 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.77□□□□□ -0.53
NDUFA1O15239 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 AL139327.4-201ENST00000612362 153 ntBASIC11.77□□□□□ -0.53
NDUFA1O15239 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC11.77□□□□□ -0.53
NDUFA1O15239 AC141257.4-201ENST00000634557 245 ntBASIC11.77□□□□□ -0.53
NDUFA1O15239 AC136944.6-201ENST00000634818 245 ntBASIC11.77□□□□□ -0.53
NDUFA1O15239 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.77□□□□□ -0.53
NDUFA1O15239 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.77□□□□□ -0.53
NDUFA1O15239 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
NDUFA1O15239 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.77□□□□□ -0.53
NDUFA1O15239 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.77□□□□□ -0.53
NDUFA1O15239 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFA1O15239 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFA1O15239 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFA1O15239 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 AC092171.3-201ENST00000610122 2651 ntBASIC11.76□□□□□ -0.53
NDUFA1O15239 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 AC092053.1-201ENST00000605787 1936 ntBASIC11.76□□□□□ -0.53
NDUFA1O15239 TSPY26P-202ENST00000565928 3884 ntBASIC11.76□□□□□ -0.53
NDUFA1O15239 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.76□□□□□ -0.53
NDUFA1O15239 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.76□□□□□ -0.53
NDUFA1O15239 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFA1O15239 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.76□□□□□ -0.53
NDUFA1O15239 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
NDUFA1O15239 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
NDUFA1O15239 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
NDUFA1O15239 ATP5G1P1-201ENST00000448724 379 ntBASIC11.76□□□□□ -0.53
NDUFA1O15239 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.76□□□□□ -0.53
NDUFA1O15239 AC124947.2-201ENST00000547118 1133 ntBASIC11.76□□□□□ -0.53
NDUFA1O15239 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.76□□□□□ -0.53
NDUFA1O15239 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFA1O15239 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFA1O15239 AL031432.5-201ENST00000641059 760 ntBASIC11.76□□□□□ -0.53
NDUFA1O15239 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC11.76□□□□□ -0.53
NDUFA1O15239 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 KRT8P47-201ENST00000604727 1398 ntBASIC11.76□□□□□ -0.53
NDUFA1O15239 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms