Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ATP2A1O14983 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP2A1O14983 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ATP2A1O14983 HMGA1P7-201ENST00000406908 502 ntBASIC19.54■□□□□ 0.72
ATP2A1O14983 AL671277.1-201ENST00000429656 993 ntBASIC19.54■□□□□ 0.72
ATP2A1O14983 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP2A1O14983 AC023141.5-201ENST00000458585 616 ntBASIC19.54■□□□□ 0.72
ATP2A1O14983 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP2A1O14983 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP2A1O14983 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATP2A1O14983 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP2A1O14983 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATP2A1O14983 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP2A1O14983 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATP2A1O14983 AC007613.1-201ENST00000572811 2597 ntBASIC19.54■□□□□ 0.72
ATP2A1O14983 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP2A1O14983 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATP2A1O14983 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2A1O14983 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP2A1O14983 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP2A1O14983 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 AC016396.2-201ENST00000562575 1417 ntBASIC19.53■□□□□ 0.72
ATP2A1O14983 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 AL390961.4-201ENST00000623958 2535 ntBASIC19.53■□□□□ 0.72
ATP2A1O14983 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ATP2A1O14983 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.53■□□□□ 0.72
ATP2A1O14983 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP2A1O14983 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.53■□□□□ 0.72
ATP2A1O14983 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
ATP2A1O14983 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ATP2A1O14983 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
ATP2A1O14983 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.53■□□□□ 0.72
ATP2A1O14983 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.53■□□□□ 0.72
ATP2A1O14983 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
ATP2A1O14983 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
ATP2A1O14983 AC093028.1-201ENST00000622998 982 ntBASIC19.53■□□□□ 0.72
ATP2A1O14983 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.53■□□□□ 0.72
ATP2A1O14983 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ATP2A1O14983 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A1O14983 EGFEM1P-202ENST00000431685 1563 ntBASIC19.53■□□□□ 0.72
ATP2A1O14983 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.53■□□□□ 0.72
ATP2A1O14983 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP2A1O14983 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A1O14983 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A1O14983 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2A1O14983 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A1O14983 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A1O14983 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP2A1O14983 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A1O14983 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A1O14983 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATP2A1O14983 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP2A1O14983 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A1O14983 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATP2A1O14983 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2A1O14983 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A1O14983 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP2A1O14983 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ATP2A1O14983 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ATP2A1O14983 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP2A1O14983 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ATP2A1O14983 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP2A1O14983 AC093520.2-201ENST00000561830 333 ntBASIC19.52■□□□□ 0.72
ATP2A1O14983 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP2A1O14983 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A1O14983 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP2A1O14983 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP2A1O14983 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms