Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.04■□□□□ 0.48
SOX1O00570 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SOX1O00570 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SOX1O00570 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.04■□□□□ 0.48
SOX1O00570 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SOX1O00570 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SOX1O00570 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.03■□□□□ 0.48
SOX1O00570 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SOX1O00570 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.03■□□□□ 0.48
SOX1O00570 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SOX1O00570 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.03■□□□□ 0.48
SOX1O00570 RNU1-129P-201ENST00000384064 167 ntBASIC18.03■□□□□ 0.48
SOX1O00570 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.03■□□□□ 0.48
SOX1O00570 MPRIPP1-201ENST00000452433 1089 ntBASIC18.03■□□□□ 0.48
SOX1O00570 IGHJ2P-201ENST00000454480 60 ntBASIC18.03■□□□□ 0.48
SOX1O00570 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.03■□□□□ 0.48
SOX1O00570 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.03■□□□□ 0.48
SOX1O00570 AC044860.1-202ENST00000559481 777 ntBASIC18.03■□□□□ 0.48
SOX1O00570 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.03■□□□□ 0.48
SOX1O00570 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.03■□□□□ 0.48
SOX1O00570 U1.21-201ENST00000580816 167 ntBASIC18.03■□□□□ 0.48
SOX1O00570 BTNL10-201ENST00000595971 695 ntBASIC18.03■□□□□ 0.48
SOX1O00570 AC016629.1-201ENST00000596579 586 ntBASIC18.03■□□□□ 0.48
SOX1O00570 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.03■□□□□ 0.48
SOX1O00570 AL031055.1-201ENST00000606362 631 ntBASIC18.03■□□□□ 0.48
SOX1O00570 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SOX1O00570 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.03■□□□□ 0.48
SOX1O00570 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SOX1O00570 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SOX1O00570 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.03■□□□□ 0.48
SOX1O00570 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SOX1O00570 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.03■□□□□ 0.48
SOX1O00570 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.03■□□□□ 0.48
SOX1O00570 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SOX1O00570 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.02■□□□□ 0.48
SOX1O00570 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
SOX1O00570 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.02■□□□□ 0.48
SOX1O00570 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SOX1O00570 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SOX1O00570 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SOX1O00570 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SOX1O00570 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.02■□□□□ 0.48
SOX1O00570 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
SOX1O00570 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SOX1O00570 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.02■□□□□ 0.48
SOX1O00570 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SOX1O00570 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SOX1O00570 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.02■□□□□ 0.48
SOX1O00570 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.02■□□□□ 0.48
SOX1O00570 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SOX1O00570 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.02■□□□□ 0.48
SOX1O00570 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SOX1O00570 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.02■□□□□ 0.48
SOX1O00570 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SOX1O00570 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SOX1O00570 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SOX1O00570 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.02■□□□□ 0.47
SOX1O00570 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SOX1O00570 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SOX1O00570 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SOX1O00570 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.02■□□□□ 0.47
SOX1O00570 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.01■□□□□ 0.47
SOX1O00570 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SOX1O00570 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.01■□□□□ 0.47
SOX1O00570 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SOX1O00570 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.01■□□□□ 0.47
SOX1O00570 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.01■□□□□ 0.47
SOX1O00570 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.01■□□□□ 0.47
SOX1O00570 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.01■□□□□ 0.47
SOX1O00570 SLC25A24P2-201ENST00000415059 510 ntBASIC18.01■□□□□ 0.47
SOX1O00570 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms