Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
NACAE9PAV3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 UBALD1-205ENST00000590891 2641 ntBASIC12.59□□□□□ -0.39
NACAE9PAV3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
NACAE9PAV3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.59□□□□□ -0.39
NACAE9PAV3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.59□□□□□ -0.39
NACAE9PAV3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.59□□□□□ -0.39
NACAE9PAV3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
NACAE9PAV3 AL592071.1-201ENST00000611956 408 ntBASIC12.59□□□□□ -0.39
NACAE9PAV3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.59□□□□□ -0.39
NACAE9PAV3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
NACAE9PAV3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
NACAE9PAV3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 KRT18P1-202ENST00000452408 1331 ntBASIC12.59□□□□□ -0.39
NACAE9PAV3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
NACAE9PAV3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.59□□□□□ -0.39
NACAE9PAV3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.59□□□□□ -0.39
NACAE9PAV3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.59□□□□□ -0.39
NACAE9PAV3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.59□□□□□ -0.39
NACAE9PAV3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NACAE9PAV3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
NACAE9PAV3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
NACAE9PAV3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
NACAE9PAV3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.58□□□□□ -0.39
NACAE9PAV3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
NACAE9PAV3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
NACAE9PAV3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.58□□□□□ -0.39
NACAE9PAV3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.58□□□□□ -0.39
NACAE9PAV3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
NACAE9PAV3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.58□□□□□ -0.39
NACAE9PAV3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
NACAE9PAV3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.58□□□□□ -0.4
NACAE9PAV3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.58□□□□□ -0.4
NACAE9PAV3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
NACAE9PAV3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 AC008741.2-201ENST00000612792 3115 ntBASIC12.58□□□□□ -0.4
NACAE9PAV3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NACAE9PAV3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.58□□□□□ -0.4
NACAE9PAV3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.58□□□□□ -0.4
NACAE9PAV3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.58□□□□□ -0.4
NACAE9PAV3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
NACAE9PAV3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.58□□□□□ -0.4
NACAE9PAV3 AP003733.1-201ENST00000491725 852 ntBASIC12.58□□□□□ -0.4
NACAE9PAV3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.58□□□□□ -0.4
NACAE9PAV3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.58□□□□□ -0.4
NACAE9PAV3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.58□□□□□ -0.4
NACAE9PAV3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NACAE9PAV3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
NACAE9PAV3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NACAE9PAV3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.57□□□□□ -0.4
NACAE9PAV3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NACAE9PAV3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.57□□□□□ -0.4
NACAE9PAV3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms