Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 AL390955.1-201ENST00000428694 934 ntBASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 AC128688.1-201ENST00000487626 519 ntBASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 AP000525.1-201ENST00000608286 694 ntBASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 TSPY26P-202ENST00000565928 3884 ntBASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRDV1A0A1B0GX56 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRDV1A0A1B0GX56 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRDV1A0A1B0GX56 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRDV1A0A1B0GX56 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRDV1A0A1B0GX56 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRDV1A0A1B0GX56 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRDV1A0A1B0GX56 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.08■□□□□ 0.01
TRDV1A0A1B0GX56 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.08■□□□□ 0.01
TRDV1A0A1B0GX56 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.08■□□□□ 0.01
TRDV1A0A1B0GX56 AC126177.1-201ENST00000547829 2218 ntBASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 INGX-201ENST00000359239 846 ntBASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 AC034232.1-201ENST00000506026 1064 ntBASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRDV1A0A1B0GX56 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms