Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 IGHV3-47-201ENST00000425060 335 ntBASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC073592.4-201ENST00000623827 446 ntBASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV5-3A0A0A0MS03 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 AP002383.4-201ENST00000442518 975 ntBASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC013467.2-201ENST00000605472 835 ntBASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-3A0A0A0MS03 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 NSUN5P1-202ENST00000421140 1535 ntBASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 NSUN5P2-203ENST00000457352 1529 ntBASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV5-3A0A0A0MS03 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms