Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 AL353593.2-201ENST00000602529 1483 ntBASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 PRORSD1P-202ENST00000563365 2154 ntBASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 INTS4P1-201ENST00000438455 1935 ntBASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 AC093525.9-201ENST00000624961 1746 ntBASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV1A0A0A0MS02 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 AC009336.1-201ENST00000608941 1553 ntBASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 HCG4P8-203ENST00000443049 980 ntBASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 AC116353.5-201ENST00000638148 1699 ntBASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV1A0A0A0MS02 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms